RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 IGSF9BQ9UPX0 1349 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 TCHHQ07283 1943 aa16.92■□□□□ 0.3
PDCD6-211ENST00000515587 YEATS4O95619 227 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 GNAT1P11488 350 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 QARSP47897 775 aaKnown RBP16.91■□□□□ 0.3
PDCD6-211ENST00000515587 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
PDCD6-211ENST00000515587 KRT85P78386 507 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 DNM1Q05193 864 aaKnown RBP16.91■□□□□ 0.3
PDCD6-211ENST00000515587 SLC39A14Q15043 492 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 PTPAQ15257 358 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 C1orf53Q5VUE5 145 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 HAUS3Q68CZ6 603 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 SLC43A3Q8NBI5 491 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 BANK1Q8NDB2 785 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 EIF2AK1Q9BQI3 630 aaKnown RBP16.91■□□□□ 0.3
PDCD6-211ENST00000515587 NRBP2Q9NSY0 501 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 ATP11BQ9Y2G3 1177 aa16.91■□□□□ 0.3
PDCD6-211ENST00000515587 POTEB3A0JP26 581 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 DCDC2CA8MYV0 355 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 SPTLC2O15270 562 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 HBP1O60381 514 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
PDCD6-211ENST00000515587 SMIM10L2AP0DMW4 78 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 SMIM10L2BP0DMW5 78 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
PDCD6-211ENST00000515587 RTP1P59025 263 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 PPFIA1Q13136 1202 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 SNX17Q15036 470 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 PLCB4Q15147 1175 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 LRRC26Q2I0M4 334 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 TRIM60Q495X7 471 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 POTEBQ6S5H4 581 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 SESTD1Q86VW0 696 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 ATP8B4Q8TF62 1192 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 BBXQ8WY36 941 aaPredicted RBP16.9■□□□□ 0.3
PDCD6-211ENST00000515587 DYDC2Q96IM9 177 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 AK8Q96MA6 479 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 RNPEPQ9H4A4 650 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 ZSWIM4Q9H7M6 989 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 TUFT1Q9NNX1 390 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 HDAC6Q9UBN7 1215 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 NOD1Q9Y239 953 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 MORC2Q9Y6X9 1032 aaPredicted RBP16.9■□□□□ 0.3
PDCD6-211ENST00000515587 GRIN2DO15399 1336 aa16.9■□□□□ 0.3
PDCD6-211ENST00000515587 TRIP12Q14669 1992 aaPredicted RBP16.89■□□□□ 0.3
PDCD6-211ENST00000515587 C17orf102A2RUQ5 167 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 OATP04181 439 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 MARCKSP29966 332 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-211ENST00000515587 CDK7P50613 346 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 PRKCEQ02156 737 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 CYP4A11Q02928 519 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 UGCGQ16739 394 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 KRT79Q5XKE5 535 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 FAM109BQ6ICB4 259 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-211ENST00000515587 TPH2Q8IWU9 490 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 KRI1Q8N9T8 703 aaKnown RBP16.89■□□□□ 0.29
PDCD6-211ENST00000515587 LINC00301Q8NCQ3 95 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 KCNG4Q8TDN1 519 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 LXNQ9BS40 222 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 POLR3CQ9BUI4 534 aaPredicted RBP16.89■□□□□ 0.29
PDCD6-211ENST00000515587 GTF2IRD1Q9UHL9 959 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 SRPRBQ9Y5M8 271 aaKnown RBP16.89■□□□□ 0.29
PDCD6-211ENST00000515587 NRCAMQ92823 1304 aa16.89■□□□□ 0.29
PDCD6-211ENST00000515587 LOXHD1Q8IVV2 1947 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 RRN3P2A6NIE6 340 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 DDX11L8A8MPP1 907 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 CCT6AP40227 531 aaKnown RBP16.88■□□□□ 0.29
PDCD6-211ENST00000515587 TLE2Q04725 743 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 CTTNQ14247 550 aaKnown RBP16.88■□□□□ 0.29
PDCD6-211ENST00000515587 IL17AQ16552 155 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 XKR3Q5GH77 459 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 ZNF484Q5JVG2 852 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 OTUD6AQ7L8S5 288 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 TRMT1LQ7Z2T5 733 aaKnown RBP16.88■□□□□ 0.29
PDCD6-211ENST00000515587 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 PPP1R13LQ8WUF5 828 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 CCDC43Q96MW1 224 aaKnown RBP16.88■□□□□ 0.29
PDCD6-211ENST00000515587 TOX2Q96NM4 488 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 HSD17B14Q9BPX1 270 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 RGL1Q9NZL6 768 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 SEPT9Q9UHD8 586 aaPredicted RBP16.88■□□□□ 0.29
PDCD6-211ENST00000515587 COL1A2P08123 1366 aa16.88■□□□□ 0.29
PDCD6-211ENST00000515587 ZNF862O60290 1169 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 PPP6R2O75170 966 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 SLITRK3O94933 977 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 INSRRP14616 1297 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 ATP4AP20648 1035 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 RPA1P27694 616 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 UBA7P41226 1012 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 IGBP1P78318 339 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
PDCD6-211ENST00000515587 GRIK4Q16099 956 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 PTGISQ16647 500 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 C4orf19Q8IY42 314 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 SPATA32Q96LK8 384 aa16.87■□□□□ 0.29
PDCD6-211ENST00000515587 SCAND2PQ9GZW5 306 aaPredicted RBP16.87■□□□□ 0.29
PDCD6-211ENST00000515587 SETD4Q9NVD3 440 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms