RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 SUGCTQ9HAC7 445 aa19.86■□□□□ 0.77
DDX41-217ENST00000515562 NCOA5Q9HCD5 579 aaKnown RBP19.86■□□□□ 0.77
DDX41-217ENST00000515562 COG5Q9UP83 839 aa19.86■□□□□ 0.77
DDX41-217ENST00000515562 RBAK-RBAKDNI3L0D1 243 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 DHX15O43143 795 aaKnown RBP19.85■□□□□ 0.77
DDX41-217ENST00000515562 UPP2O95045 317 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 ZNF746Q6NUN9 644 aaPredicted RBP19.85■□□□□ 0.77
DDX41-217ENST00000515562 SMAP1Q8IYB5 467 aaPredicted RBP19.85■□□□□ 0.77
DDX41-217ENST00000515562 FBXO22Q8NEZ5 403 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 ATP8B4Q8TF62 1192 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 ZNF274Q96GC6 653 aaPredicted RBP19.85■□□□□ 0.77
DDX41-217ENST00000515562 ZNF302Q9NR11 478 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 VPS54Q9P1Q0 977 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 TRPV2Q9Y5S1 764 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 SQORQ9Y6N5 450 aa19.85■□□□□ 0.77
DDX41-217ENST00000515562 COL1A2P08123 1366 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 REV3LO60673 3130 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 SMIM35A0A1B0GVV1 85 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 CPLX1O14810 134 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 ADAMTS3O15072 1205 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 HBP1O60381 514 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 CIITAP33076 1130 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 KRT76Q01546 638 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 PRR16Q569H4 304 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 PDXDC2PQ6P474 469 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 CPLX2Q6PUV4 134 aaKnown RBP19.84■□□□□ 0.77
DDX41-217ENST00000515562 CCDC60Q8IWA6 550 aaPredicted RBP19.84■□□□□ 0.77
DDX41-217ENST00000515562 RASGRP4Q8TDF6 673 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 ADAMTS19Q8TE59 1207 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 TRAPPC12Q8WVT3 735 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 ZBTB10Q96DT7 871 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 C17orf80Q9BSJ5 609 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 UPF3BQ9BZI7 483 aaKnown RBP19.84■□□□□ 0.77
DDX41-217ENST00000515562 RALGAPA2Q2PPJ7 1873 aa19.84■□□□□ 0.77
DDX41-217ENST00000515562 TTC28Q96AY4 2481 aa19.83■□□□□ 0.77
DDX41-217ENST00000515562 PPFIA3O75145 1194 aa19.83■□□□□ 0.77
DDX41-217ENST00000515562 NLRP5P59047 1200 aa19.83■□□□□ 0.77
DDX41-217ENST00000515562 SSRP1Q08945 709 aaKnown RBP19.83■□□□□ 0.77
DDX41-217ENST00000515562 MTHFD1LQ6UB35 978 aa19.83■□□□□ 0.77
DDX41-217ENST00000515562 FAM177A1Q8N128 213 aaPredicted RBP19.83■□□□□ 0.77
DDX41-217ENST00000515562 NME8Q8N427 588 aa19.83■□□□□ 0.77
DDX41-217ENST00000515562 FTHL17Q9BXU8 183 aa19.83■□□□□ 0.77
DDX41-217ENST00000515562 C22orf23Q9BZE7 217 aa19.83■□□□□ 0.77
DDX41-217ENST00000515562 IGSF9BQ9UPX0 1349 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 KDM3AQ9Y4C1 1321 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 NLRC5Q86WI3 1866 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 DEXIO95424 95 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 ZNF484Q5JVG2 852 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 SWSAP1Q6NVH7 229 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 IL17RAQ96F46 866 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 PPP4R2Q9NY27 417 aa19.82■□□□□ 0.76
DDX41-217ENST00000515562 XIRP2A4UGR9 3374 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 ADGRA3Q8IWK6 1321 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 TNFRSF10AO00220 468 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 PSAPP07602 524 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 KLRC1P26715 233 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 CD52P31358 61 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 USP11P51784 963 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 TFF2Q03403 129 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 TMEM62Q0P6H9 643 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 PTPROQ16827 1216 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 EPC2Q52LR7 807 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 ERICH6BQ5W0A0 696 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 FAM43BQ6ZT52 329 aaPredicted RBP19.81■□□□□ 0.76
DDX41-217ENST00000515562 CKAP2LQ8IYA6 745 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 BBXQ8WY36 941 aaPredicted RBP19.81■□□□□ 0.76
DDX41-217ENST00000515562 HLA-CQ95604 372 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 LENG9Q96B70 501 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 CELF4Q9BZC1 486 aaKnown RBP19.81■□□□□ 0.76
DDX41-217ENST00000515562 AGO3Q9H9G7 860 aaKnown RBP19.81■□□□□ 0.76
DDX41-217ENST00000515562 PDRG1Q9NUG6 133 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 PCDHA10Q9Y5I2 948 aa19.81■□□□□ 0.76
DDX41-217ENST00000515562 MAFBQ9Y5Q3 323 aaPredicted RBP19.81■□□□□ 0.76
DDX41-217ENST00000515562 WDR64B1ANS9 1081 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 ENPP3O14638 875 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 PAK2Q13177 524 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 FIBCD1Q8N539 461 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 FAM167AQ96KS9 214 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 UIMC1Q96RL1 719 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 UHRF1Q96T88 793 aaPredicted RBP19.8■□□□□ 0.76
DDX41-217ENST00000515562 PCDHA4Q9UN74 947 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 CEP131Q9UPN4 1083 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 RWDD3Q9Y3V2 267 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 SAMM50Q9Y512 469 aa19.8■□□□□ 0.76
DDX41-217ENST00000515562 MYH9P35579 1960 aaKnown RBP19.8■□□□□ 0.76
DDX41-217ENST00000515562 CDKL5O76039 1030 aa19.79■□□□□ 0.76
DDX41-217ENST00000515562 GALNT17Q6IS24 598 aa19.79■□□□□ 0.76
DDX41-217ENST00000515562 TMEM192Q8IY95 271 aa19.79■□□□□ 0.76
DDX41-217ENST00000515562 MRPL38Q96DV4 380 aaKnown RBP19.79■□□□□ 0.76
DDX41-217ENST00000515562 RIT2Q99578 217 aa19.79■□□□□ 0.76
DDX41-217ENST00000515562 RC3H2Q9HBD1 1191 aaKnown RBP19.79■□□□□ 0.76
DDX41-217ENST00000515562 PADI3Q9ULW8 664 aa19.79■□□□□ 0.76
DDX41-217ENST00000515562 TTC3P53804 2025 aa19.79■□□□□ 0.76
DDX41-217ENST00000515562 MUC3AQ02505 3323 aa19.79■□□□□ 0.76
DDX41-217ENST00000515562 ZBTB42B2RXF5 422 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 H3BNC9 293 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 BMP1P13497 986 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 ATP4AP20648 1035 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 STK3Q13188 491 aa19.78■□□□□ 0.76
DDX41-217ENST00000515562 TIGD5Q53EQ6 642 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms