RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ORC2Q13416 577 aaPredicted RBP15.7■□□□□ 0.1
USP46-209ENST00000514536 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP46-209ENST00000514536 PIAS4Q8N2W9 510 aaPredicted RBP15.7■□□□□ 0.1
USP46-209ENST00000514536 SPRYD3Q8NCJ5 442 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
USP46-209ENST00000514536 NRBP2Q9NSY0 501 aa15.7■□□□□ 0.1
USP46-209ENST00000514536 MBLAC1A4D2B0 266 aaPredicted RBP15.69■□□□□ 0.1
USP46-209ENST00000514536 OR52Z1P0C646 297 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 THPOP40225 353 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 SPIRE1Q08AE8 756 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 EPHA7Q15375 998 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 RILPL1Q5EBL4 403 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 RUFY4Q6ZNE9 571 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 C16orf59Q7L2K0 433 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 FERMT3Q86UX7 667 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 C4orf32Q8N8J7 132 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 BANK1Q8NDB2 785 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 TUBE1Q9UJT0 475 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 IGSF9BQ9UPX0 1349 aa15.69■□□□□ 0.1
USP46-209ENST00000514536 OATP04181 439 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 SELPP16109 830 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 KLRC1P26715 233 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 TECP42680 631 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 PSMC5P62195 406 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 PRKCEQ02156 737 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 RBL2Q08999 1139 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 SHHQ15465 462 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 ZNF484Q5JVG2 852 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 C9orf50Q5SZB4 431 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 ZNF618Q5T7W0 954 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 DEFB128Q7Z7B8 93 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 FAM167AQ96KS9 214 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 IL23AQ9NPF7 189 aa15.68■□□□□ 0.1
USP46-209ENST00000514536 A0A1W2PPC1 479 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 P4HBP07237 508 aaKnown RBP15.67■□□□□ 0.1
USP46-209ENST00000514536 QARSP47897 775 aaKnown RBP15.67■□□□□ 0.1
USP46-209ENST00000514536 PTGDRQ13258 359 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 TAF2Q6P1X5 1199 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 MTHFD1LQ6UB35 978 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 LRRC8DQ7L1W4 858 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
USP46-209ENST00000514536 DYDC2Q96IM9 177 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.67■□□□□ 0.1
USP46-209ENST00000514536 RGL1Q9NZL6 768 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 PCDHA2Q9Y5H9 948 aa15.67■□□□□ 0.1
USP46-209ENST00000514536 POTEMA6NI47 508 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 DDX11L8A8MPP1 907 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 ZBTB42B2RXF5 422 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 RBAK-RBAKDNI3L0D1 243 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
USP46-209ENST00000514536 STBD1O95210 358 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 CYP4A11Q02928 519 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 CTTNQ14247 550 aaKnown RBP15.66■□□□□ 0.1
USP46-209ENST00000514536 XKR3Q5GH77 459 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 TRAF7Q6Q0C0 670 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 BRAPQ7Z569 592 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 TDHQ8IZJ6 230 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 DNAJB3Q8WWF6 145 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 VWCEQ96DN2 955 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 EIF2AK1Q9BQI3 630 aaKnown RBP15.66■□□□□ 0.1
USP46-209ENST00000514536 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.66■□□□□ 0.1
USP46-209ENST00000514536 FAM49AQ9H0Q0 323 aaPredicted RBP15.66■□□□□ 0.1
USP46-209ENST00000514536 MTMR6Q9Y217 621 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 LAMA3Q16787 3333 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 COL1A2P08123 1366 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 RSPH10B2B2RC85 870 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 STX6O43752 255 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 CTSHP09668 335 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 RSPH10BP0C881 870 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 GPNMBQ14956 572 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 RSPH3Q86UC2 560 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 TPH2Q8IWU9 490 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 WRAP73Q9P2S5 460 aaPredicted RBP15.66■□□□□ 0.1
USP46-209ENST00000514536 CEP131Q9UPN4 1083 aa15.66■□□□□ 0.1
USP46-209ENST00000514536 LTBP2Q14767 1821 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 TRIP12Q14669 1992 aaPredicted RBP15.65■□□□□ 0.1
USP46-209ENST00000514536 TMEM150BA6NC51 233 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 DKC1O60832 514 aaKnown RBP eCLIP15.65■□□□□ 0.1
USP46-209ENST00000514536 CAND2O75155 1236 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 SLITRK3O94933 977 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 FGBP02675 491 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 RFC2P35250 354 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 RPAINQ86UA6 219 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 HSD17B14Q9BPX1 270 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 SH2D3AQ9BRG2 576 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 LXNQ9BS40 222 aa15.65■□□□□ 0.1
USP46-209ENST00000514536 NIFKQ9BYG3 293 aaKnown RBP15.65■□□□□ 0.1
USP46-209ENST00000514536 FTOQ9C0B1 505 aaKnown RBP eCLIP15.65■□□□□ 0.1
USP46-209ENST00000514536 SEPT9Q9UHD8 586 aaPredicted RBP15.65■□□□□ 0.1
USP46-209ENST00000514536 SMIM35A0A1B0GVV1 85 aa15.64■□□□□ 0.09
USP46-209ENST00000514536 NBNO60934 754 aa15.64■□□□□ 0.09
USP46-209ENST00000514536 PARNO95453 639 aaKnown RBP15.64■□□□□ 0.09
USP46-209ENST00000514536 C22orf31O95567 290 aa15.64■□□□□ 0.09
USP46-209ENST00000514536 RESTQ13127 1097 aa15.64■□□□□ 0.09
USP46-209ENST00000514536 MBTPS1Q14703 1052 aa15.64■□□□□ 0.09
USP46-209ENST00000514536 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
USP46-209ENST00000514536 TMEM266Q2M3C6 531 aa15.64■□□□□ 0.09
USP46-209ENST00000514536 MTERF2Q49AM1 385 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms