RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 UBE2OQ9C0C9 1292 aaKnown RBP16.3■□□□□ 0.2
SNF8-212ENST00000514089 ZSWIM4Q9H7M6 989 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.3■□□□□ 0.2
SNF8-212ENST00000514089 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 LRWD1Q9UFC0 647 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 TBX21Q9UL17 535 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
SNF8-212ENST00000514089 KLRC1P26715 233 aa16.29■□□□□ 0.2
SNF8-212ENST00000514089 MAGEA10P43363 369 aaPredicted RBP16.29■□□□□ 0.2
SNF8-212ENST00000514089 RESTQ13127 1097 aa16.29■□□□□ 0.2
SNF8-212ENST00000514089 SF3A1Q15459 793 aaKnown RBP16.29■□□□□ 0.2
SNF8-212ENST00000514089 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
SNF8-212ENST00000514089 MFSD5Q6N075 450 aa16.29■□□□□ 0.2
SNF8-212ENST00000514089 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
SNF8-212ENST00000514089 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
SNF8-212ENST00000514089 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
SNF8-212ENST00000514089 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
SNF8-212ENST00000514089 NOC4LQ9BVI4 516 aaKnown RBP16.29■□□□□ 0.2
SNF8-212ENST00000514089 POTEMA6NI47 508 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 M0QZ92 97 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 ATP4AP20648 1035 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 TMOD1P28289 359 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 PRPHP41219 470 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 FPGSQ05932 587 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 PDIA5Q14554 519 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 ZRSR1Q15695 479 aaKnown RBP16.28■□□□□ 0.2
SNF8-212ENST00000514089 UGCGQ16739 394 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 MTERF2Q49AM1 385 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 HAUS3Q68CZ6 603 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 TRAPPC12Q8WVT3 735 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 LXNQ9BS40 222 aa16.28■□□□□ 0.2
SNF8-212ENST00000514089 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNF8-212ENST00000514089 FAM49AQ9H0Q0 323 aaPredicted RBP16.28■□□□□ 0.2
SNF8-212ENST00000514089 VWA3AA6NCI4 1184 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 MAGEB2O15479 319 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 ZNF862O60290 1169 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 SLITRK3O94933 977 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 RPLP2P05387 115 aaKnown RBP16.27■□□□□ 0.2
SNF8-212ENST00000514089 CKBP12277 381 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 SELPP16109 830 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 YWHABP31946 246 aaKnown RBP16.27■□□□□ 0.2
SNF8-212ENST00000514089 CCT6AP40227 531 aaKnown RBP16.27■□□□□ 0.2
SNF8-212ENST00000514089 DNM2P50570 870 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.2
SNF8-212ENST00000514089 TBC1D8BQ0IIM8 1120 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 PPIGQ13427 754 aaKnown RBP eCLIP16.27■□□□□ 0.23e-7■■□□□ 12
SNF8-212ENST00000514089 HIC1Q14526 733 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 MTHFD1LQ6UB35 978 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 CHRDL2Q6WN34 429 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 RASSF8Q8NHQ8 419 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 DNAJB3Q8WWF6 145 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 CEP170P1Q96L14 293 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 SUGCTQ9HAC7 445 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 PCDHA2Q9Y5H9 948 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 CLIC4Q9Y696 253 aa16.27■□□□□ 0.2
SNF8-212ENST00000514089 COL1A2P08123 1366 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 RSPH10B2B2RC85 870 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 F13A1P00488 732 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 CTSHP09668 335 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 RSPH10BP0C881 870 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 CSF2RAP15509 400 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 ITGB8P26012 769 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 ATP2C1P98194 919 aaPredicted RBP16.26■□□□□ 0.19
SNF8-212ENST00000514089 SPIRE1Q08AE8 756 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 STK38Q15208 465 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 XKR9Q5GH70 373 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 IER5Q5VY09 327 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 ARL6IP4Q66PJ3 421 aaKnown RBP16.26■□□□□ 0.19
SNF8-212ENST00000514089 LRRC8DQ7L1W4 858 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 DEFB128Q7Z7B8 93 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 C4orf19Q8IY42 314 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 EXOC8Q8IYI6 725 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 SCLYQ96I15 445 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 HSD17B14Q9BPX1 270 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 JPH2Q9BR39 696 aaPredicted RBP16.26■□□□□ 0.19
SNF8-212ENST00000514089 TUFT1Q9NNX1 390 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 PCDH10Q9P2E7 1040 aa16.26■□□□□ 0.19
SNF8-212ENST00000514089 TFIP11Q9UBB9 837 aaKnown RBP16.26■□□□□ 0.19
SNF8-212ENST00000514089 UMODL1Q5DID0 1318 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
SNF8-212ENST00000514089 UBA7P41226 1012 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 MARCH8Q5T0T0 291 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 ZNF618Q5T7W0 954 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 EFCAB12Q6NXP0 572 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 RUFY4Q6ZNE9 571 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 NME8Q8N427 588 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 SNX29Q8TEQ0 813 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 SLC7A3Q8WY07 619 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 ZBTB10Q96DT7 871 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 NACC1Q96RE7 527 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 MAP7D2Q96T17 732 aa16.25■□□□□ 0.19
SNF8-212ENST00000514089 SH2D3AQ9BRG2 576 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms