RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 LRCH2Q5VUJ6 765 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 LRRC55Q6ZSA7 311 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 UBL4BQ8N7F7 174 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 PACSIN1Q9BY11 444 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 MYH3P11055 1940 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 ZSCAN5CA6NGD5 496 aaPredicted RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 LRRN2O75325 713 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 CYP11B2P19099 503 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 LMNB1P20700 586 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 HNRNPH3P31942 346 aaKnown RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 GUCY1A3Q02108 690 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 DHX9Q08211 1270 aaKnown RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 CTTNQ14247 550 aaKnown RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 SEL1L2Q5TEA6 688 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 SPATS2Q86XZ4 545 aaKnown RBP12.51□□□□□ -0.41
CTNND2-215ENST00000513588 NUP98P52948 1817 aa12.51□□□□□ -0.41
CTNND2-215ENST00000513588 GSTTP1A0A1W2PQM5 241 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 M0R2N6 131 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 GLI1P08151 1106 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 CORO7P57737 925 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 EDRF1Q3B7T1 1238 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 PLVAPQ9BX97 442 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 MTUS1Q9ULD2 1270 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 ATP8A1Q9Y2Q0 1164 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 RAD51CO43502 376 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 GAP43P17677 238 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 MAP2K1Q02750 393 aaPredicted RBP12.5□□□□□ -0.41
CTNND2-215ENST00000513588 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 FRMD5Q7Z6J6 570 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 HOOK3Q86VS8 718 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
CTNND2-215ENST00000513588 REEP2Q9BRK0 252 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 TYW1Q9NV66 732 aaKnown RBP12.5□□□□□ -0.41
CTNND2-215ENST00000513588 PI4KBQ9UBF8 816 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 CCDC188H7C350 402 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 FGGP02679 453 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 BAP1Q92560 729 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 ARHGEF10LQ9HCE6 1279 aa12.5□□□□□ -0.41
CTNND2-215ENST00000513588 DISP2A7MBM2 1401 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 SART1O43290 800 aaKnown RBP12.49□□□□□ -0.41
CTNND2-215ENST00000513588 ANKS4BQ8N8V4 417 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 SCFD1Q8WVM8 642 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 ATP6V1G3Q96LB4 118 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 EFCC1Q9HA90 598 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 PJA2O43164 708 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 BMP3P12645 472 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 CALCOCO2Q13137 446 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 PPP1R7Q15435 360 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 TMEM119Q4V9L6 283 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 SYDE2Q5VT97 1194 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 DENND2CQ68D51 928 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTNND2-215ENST00000513588 PARVGQ9HBI0 331 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 FAM114A2Q9NRY5 505 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 AMACRQ9UHK6 382 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 NOVA2Q9UNW9 492 aaKnown RBP12.49□□□□□ -0.41
CTNND2-215ENST00000513588 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
CTNND2-215ENST00000513588 BCL9LQ86UU0 1499 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 TULP2O00295 520 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 TSEN2Q8NCE0 465 aaKnown RBP12.49□□□□□ -0.41
CTNND2-215ENST00000513588 UHMK1Q8TAS1 419 aaKnown RBP12.49□□□□□ -0.41
CTNND2-215ENST00000513588 LRRC15Q8TF66 581 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 FAM20AQ96MK3 541 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 RGL1Q9NZL6 768 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 POLLQ9UGP5 575 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 DAAM1Q9Y4D1 1078 aa12.49□□□□□ -0.41
CTNND2-215ENST00000513588 F5H6K3 240 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 PDXKO00764 312 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 MED24O75448 989 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 MYBP10242 640 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 MYL7Q01449 175 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 KLRC3Q07444 240 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 KCNMA1Q12791 1236 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 PPP2R5EQ16537 467 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTNND2-215ENST00000513588 GLYCTKQ8IVS8 523 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 CCDC105Q8IYK2 499 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 DCAF4Q8WV16 495 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 EHD4Q9H223 541 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 DNAJC12Q9UKB3 198 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 VIMP08670 466 aaKnown RBP12.48□□□□□ -0.41
CTNND2-215ENST00000513588 RHBDL3P58872 404 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 CEP57Q86XR8 500 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 DNAAF5Q86Y56 855 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 GIMAP7Q8NHV1 300 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 PURBQ96QR8 312 aaKnown RBP12.48□□□□□ -0.41
CTNND2-215ENST00000513588 K7ENM7 598 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 DAPK3O43293 454 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 POLR2MP0CAP2 368 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 CRKP46108 304 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 PLTPP55058 493 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 COBLL1Q53SF7 1204 aa12.48□□□□□ -0.41
CTNND2-215ENST00000513588 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms