RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 NPAS4Q8IUM7 802 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 SMRP1Q8NCR6 262 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 PRSS33Q8NF86 280 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 VN1R2Q8NFZ6 395 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 MAP4K1Q92918 833 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 CDHR1Q96JP9 859 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 PGBD1Q96JS3 809 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 POP1Q99575 1024 aaKnown RBP11.06□□□□□ -0.64
TCOF1-212ENST00000513538 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
TCOF1-212ENST00000513538 KCNH6Q9H252 994 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-212ENST00000513538 HCSTQ9UBK5 93 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 SEC63Q9UGP8 760 aaKnown RBP11.06□□□□□ -0.64
TCOF1-212ENST00000513538 PADI3Q9ULW8 664 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 BARX2Q9UMQ3 279 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-212ENST00000513538 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 PCDHA8Q9Y5H6 950 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 SQORQ9Y6N5 450 aa11.06□□□□□ -0.64
TCOF1-212ENST00000513538 ZDBF2Q9HCK1 2354 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 LOC730098B7Z3J9 87 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 PRC1O43663 620 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 MGEA5O60502 916 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 SCG2P13521 617 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 KIF5BP33176 963 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 NRIP1P48552 1158 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 COASYQ13057 564 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 ITGB3BPQ13352 177 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-212ENST00000513538 IER5LQ5T953 404 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 RBM23Q86U06 439 aaKnown RBP11.05□□□□□ -0.64
TCOF1-212ENST00000513538 EFHBQ8N7U6 833 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 POF1BQ8WVV4 589 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 RUFY2Q8WXA3 655 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 EDAQ92838 391 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 LZTS2Q9BRK4 669 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 KCNH7Q9NS40 1196 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 SLC9A2Q9UBY0 812 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
TCOF1-212ENST00000513538 RRN3P2A6NIE6 340 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 CCNE2O96020 404 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 ARP10275 920 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 ACTR2P61160 394 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 PAK2Q13177 524 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 CBX2Q14781 532 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-212ENST00000513538 IER5Q5VY09 327 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 TMTC3Q6ZXV5 915 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 CCDC82Q8N4S0 544 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 MXRA8Q9BRK3 442 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 FTHL17Q9BXU8 183 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 LRRC2Q9BYS8 371 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
TCOF1-212ENST00000513538 CDHR5Q9HBB8 845 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 ERVK-5Q9HDB9 667 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
TCOF1-212ENST00000513538 USP15Q9Y4E8 981 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-212ENST00000513538 MYH9P35579 1960 aaKnown RBP11.03□□□□□ -0.64
TCOF1-212ENST00000513538 TMEM221A6NGB7 291 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 M0R296 226 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 PER2O15055 1255 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 IBSPP21815 317 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-212ENST00000513538 GNAQP50148 359 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 NAALADL2Q58DX5 795 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 MTHFD1LQ6UB35 978 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 NFXL1Q6ZNB6 911 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 TRIM67Q6ZTA4 783 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 HEATR3Q7Z4Q2 680 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 BMP8AQ7Z5Y6 402 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 ATP8B4Q8TF62 1192 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 MTA3Q9BTC8 594 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 LSG1Q9H089 658 aaKnown RBP11.03□□□□□ -0.64
TCOF1-212ENST00000513538 NOC2LQ9Y3T9 749 aaKnown RBP11.03□□□□□ -0.64
TCOF1-212ENST00000513538 NFASCO94856 1347 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
TCOF1-212ENST00000513538 IGKV6D-21A0A0A0MT36 114 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 SMIM35A0A1B0GVV1 85 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 CCDC69A6NI79 296 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 ZBTB42B2RXF5 422 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 SLC27A2O14975 620 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 MAFGO15525 162 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 ATG7O95352 703 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 STAG3L1P0CL83 205 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 MCM5P33992 734 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 LIFRP42702 1097 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 SARSP49591 514 aaKnown RBP11.02□□□□□ -0.65
TCOF1-212ENST00000513538 STAT5BP51692 787 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 ERVFC1P60507 584 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 ZXDAP98168 799 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 KRT76Q01546 638 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 FUT2Q10981 343 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 TCF15Q12870 199 aa11.02□□□□□ -0.65
TCOF1-212ENST00000513538 NFX1Q12986 1120 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms