RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MYH7BA7E2Y1 1941 aa11.92□□□□□ -0.5
PDLIM5-217ENST00000512274 ESYT2A0FGR8 921 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 EYA4O95677 639 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 MMP3P08254 477 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 PDHBP11177 359 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 SCG2P13521 617 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 SLC1A4P43007 532 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 PTK7Q13308 1070 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 CBX2Q14781 532 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 SAFBQ15424 915 aaKnown RBP eCLIP11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 TRIM71Q2Q1W2 868 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 SLC30A10Q6XR72 485 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 ZBTB33Q86T24 672 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 SESTD1Q86VW0 696 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 FIBCD1Q8N539 461 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 DCAF4Q8WV16 495 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 LEO1Q8WVC0 666 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 RMDN1Q96DB5 314 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 MTMR8Q96EF0 704 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 RIPOR3Q96MK2 946 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 OSBPL7Q9BZF2 842 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 CLEC1BQ9P126 229 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 PRR12Q9ULL5 1215 aa11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 ZFHX2Q9C0A1 2572 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-217ENST00000512274 TCHHQ07283 1943 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 PRPF40AO75400 957 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 TRIOO75962 3097 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 RSPH10BP0C881 870 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 NCLP19338 710 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 BMPR1AP36894 532 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 THPOP40225 353 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 PSEN2P49810 448 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 ZNF543Q08ER8 600 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 LY6KQ17RY6 165 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 PLEKHG4Q58EX7 1191 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 RILPL1Q5EBL4 403 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 ADGRD2Q7Z7M1 963 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 FERMT3Q86UX7 667 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 TMEM105Q8N8V8 129 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 GMCL1Q96IK5 515 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 C11orf84Q9BUA3 381 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 IFIH1Q9BYX4 1025 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 LMAN2LQ9H0V9 348 aa11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 BARX2Q9UMQ3 279 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 USP15Q9Y4E8 981 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-217ENST00000512274 MYH6P13533 1939 aa11.9□□□□□ -0.51
PDLIM5-217ENST00000512274 SPTBN4Q9H254 2564 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 PLA2G6O60733 806 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 BMP15O95972 392 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 SP100P23497 879 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 MFSD10Q14728 455 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 NPY5RQ15761 445 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 KIAA0753Q2KHM9 967 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 SEPT14Q6ZU15 432 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 RBM23Q86U06 439 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 NOSTRINQ8IVI9 506 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 SMRP1Q8NCR6 262 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 CCDC148Q8NFR7 591 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 KCNG4Q8TDN1 519 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 CCDC12Q8WUD4 166 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 TNFRSF25Q93038 417 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 SYAP1Q96A49 352 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 PHF7Q9BWX1 381 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 BRMS1Q9HCU9 246 aa11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-217ENST00000512274 EMSYQ7Z589 1322 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 DCHS1Q96JQ0 3298 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 A0A1W2PQ27 194 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 A0A1W2PQ64 194 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 A0A1W2PQD8 194 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 C5orf67F2Z3F1 127 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 CYTH3O43739 400 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 PPP6R2O75170 966 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 GH1P01241 217 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 ICAM1P05362 532 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 RB1P06400 928 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 ZNF286BP0CG31 522 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 ICAM3P32942 547 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 SLC16A2P36021 539 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 NUBP1P53384 320 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 ZNF445P59923 1031 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 HIC1Q14526 733 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 PTPN21Q16825 1174 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 SLC35G1Q2M3R5 365 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 BTNL9Q6UXG8 535 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 RNF207Q6ZRF8 634 aa11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 DIS3L2Q8IYB7 885 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-217ENST00000512274 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms