RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-225	ENST00000511769	SPATC1L	Q9H0A9	340 aa		11.17	□□□□□ -0.62
PTPN20-225	ENST00000511769	RTN4	Q9NQC3	1192 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-225	ENST00000511769	HOMER2	Q9NSB8	354 aa		11.17	□□□□□ -0.62
PTPN20-225	ENST00000511769	PCDHB6	Q9Y5E3	794 aa		11.17	□□□□□ -0.62
PTPN20-225	ENST00000511769	DDX49	Q9Y6V7	483 aa	Known RBP	11.17	□□□□□ -0.62
PTPN20-225	ENST00000511769	TRAK2	O60296	914 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	CCNT1	O60563	726 aa	Known RBP	11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	MBD3	O95983	291 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	MCM7	P33993	719 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	USP11	P51784	963 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	SMAD2	Q15796	467 aa	Known RBP	11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	LETM2	Q2VYF4	491 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	FCHSD1	Q86WN1	690 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	ABRA	Q8N0Z2	381 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	REPS2	Q8NFH8	660 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	MAF1	Q9H063	256 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	TRPV6	Q9H1D0	765 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	RNF146	Q9NTX7	359 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	FAM184B	Q9ULE4	1060 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	TCHH	Q07283	1943 aa		11.16	□□□□□ -0.62
PTPN20-225	ENST00000511769	B4GALT4	O60513	344 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	GADD45B	O75293	160 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	DUSP11	O75319	330 aa	Known RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	PGK2	P07205	417 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	FCER1A	P12319	257 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	MARCKS	P29966	332 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	HOXA13	P31271	388 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	COPB2	P35606	906 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	ZNF76	P36508	570 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	SIGLEC14	Q08ET2	396 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	ORC2	Q13416	577 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	PTPA	Q15257	358 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	MUM1L1	Q5H9M0	696 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	GNAS	Q5JWF2	1037 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	LCE2D	Q5TA82	110 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	ADAL	Q6DHV7	355 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	RNF207	Q6ZRF8	634 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	KIAA2013	Q8IYS2	634 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	CHST13	Q8NET6	341 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	CLEC4D	Q8WXI8	215 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	TBC1D5	Q92609	795 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	PGBD1	Q96JS3	809 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	TGS1	Q96RS0	853 aa	Known RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	ANO3	Q9BYT9	981 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	MROH8	Q9H579	483 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	ACAD9	Q9H845	621 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	SPC25	Q9HBM1	224 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	CLDND1	Q9NY35	253 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	FBXO40	Q9UH90	709 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	ZNF214	Q9UL59	606 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	PCDHA7	Q9UN72	937 aa		11.15	□□□□□ -0.62
PTPN20-225	ENST00000511769	DMXL1	Q9Y485	3027 aa		11.15	□□□□□ -0.63
PTPN20-225	ENST00000511769	LAD1	O00515	517 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	NFIB	O00712	420 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	OPLAH	O14841	1288 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	MARCH6	O60337	910 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	CUTA	O60888	179 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	SLC25A27	O95847	323 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	GCFC2	P16383	781 aa	Known RBP	11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	HSD17B4	P51659	736 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	ERVK-21	P61565	698 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	PTGDR	Q13258	359 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	NSMF	Q6X4W1	530 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	RIOX2	Q8IUF8	465 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	KRI1	Q8N9T8	703 aa	Known RBP	11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	ASIC4	Q96FT7	647 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	ZBED2	Q9BTP6	218 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	ANP32E	Q9BTT0	268 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	RIPK3	Q9Y572	518 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	PARP14	Q460N5	1801 aa		11.14	□□□□□ -0.63
PTPN20-225	ENST00000511769	CHD8	Q9HCK8	2581 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	MBTPS2	O43462	519 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	NEMF	O60524	1076 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	KCNJ6	P48051	423 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	RPS6	P62753	249 aa	Known RBP	11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	ARHGAP4	P98171	946 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	TIGD5	Q53EQ6	642 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	TCEAL5	Q5H9L2	206 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	PPP4R3A	Q6IN85	833 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	DTHD1	Q6ZMT9	781 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	ANKRD35	Q8N283	1001 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	SLC43A3	Q8NBI5	491 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	BANK1	Q8NDB2	785 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	MRPL38	Q96DV4	380 aa	Known RBP	11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	MMP19	Q99542	508 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	SRPRB	Q9Y5M8	271 aa	Known RBP	11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	FAM186A	A6NE01	2351 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769	VPS13A	Q96RL7	3174 aa		11.13	□□□□□ -0.63
PTPN20-225	ENST00000511769		A0A1W2PQ27	194 aa		11.12	□□□□□ -0.63
PTPN20-225	ENST00000511769		A0A1W2PQ64	194 aa		11.12	□□□□□ -0.63
PTPN20-225	ENST00000511769		A0A1W2PQD8	194 aa		11.12	□□□□□ -0.63
PTPN20-225	ENST00000511769	PDGFB	P01127	241 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN20-225	ENST00000511769	SREBF1	P36956	1147 aa		11.12	□□□□□ -0.63
PTPN20-225	ENST00000511769	ATP2C1	P98194	919 aa	Predicted RBP	11.12	□□□□□ -0.63
PTPN20-225	ENST00000511769	GHRHR	Q02643	423 aa		11.12	□□□□□ -0.63
PTPN20-225	ENST00000511769	ITGA7	Q13683	1181 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms