RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-213ENST00000511732 YME1L1Q96TA2 773 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 LMCD1Q9NZU5 365 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 PCDHA2Q9Y5H9 948 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 ENPP3O14638 875 aa17.4■□□□□ 0.38
COL1A1-213ENST00000511732 CD52P31358 61 aa17.4■□□□□ 0.38
COL1A1-213ENST00000511732 AKAP17AQ02040 695 aaKnown RBP17.4■□□□□ 0.38
COL1A1-213ENST00000511732 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
COL1A1-213ENST00000511732 FBXO22Q8NEZ5 403 aa17.4■□□□□ 0.38
COL1A1-213ENST00000511732 LINC01599Q8WXQ3 324 aa17.4■□□□□ 0.38
COL1A1-213ENST00000511732 LENG9Q96B70 501 aa17.4■□□□□ 0.38
COL1A1-213ENST00000511732 ZNF577Q9BSK1 485 aa17.4■□□□□ 0.38
COL1A1-213ENST00000511732 UPF3BQ9BZI7 483 aaKnown RBP17.4■□□□□ 0.38
COL1A1-213ENST00000511732 WDR81Q562E7 1941 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 SMIM35A0A1B0GVV1 85 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 BACH1O14867 736 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 CIITAP33076 1130 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 SLC26A2P50443 739 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 EPC2Q52LR7 807 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 MCTP2Q6DN12 878 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 SWSAP1Q6NVH7 229 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 TSHZ1Q6ZSZ6 1077 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 RTN4RL1Q86UN2 441 aaPredicted RBP17.39■□□□□ 0.37
COL1A1-213ENST00000511732 ATP8B4Q8TF62 1192 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 TNPO1Q92973 898 aaKnown RBP17.39■□□□□ 0.37
COL1A1-213ENST00000511732 NECAB3Q96P71 396 aaPredicted RBP17.39■□□□□ 0.37
COL1A1-213ENST00000511732 RC3H2Q9HBD1 1191 aaKnown RBP17.39■□□□□ 0.37
COL1A1-213ENST00000511732 ZNF302Q9NR11 478 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 TRPV2Q9Y5S1 764 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.37
COL1A1-213ENST00000511732 ZBTB42B2RXF5 422 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 TNFRSF10AO00220 468 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 HBP1O60381 514 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 LINC00271P0C7V0 271 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 KLRC1P26715 233 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 SETQ01105 290 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-213ENST00000511732 PRR16Q569H4 304 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 IER5Q5VY09 327 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 FAM160B1Q5W0V3 765 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 MIS18BP1Q6P0N0 1132 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 PDXDC2PQ6P474 469 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 UHRF1Q96T88 793 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-213ENST00000511732 TM6SF1Q9BZW5 370 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 TBC1D22BQ9NU19 505 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 COG5Q9UP83 839 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 SQORQ9Y6N5 450 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 MYH9P35579 1960 aaKnown RBP17.38■□□□□ 0.37
COL1A1-213ENST00000511732 TTC3P53804 2025 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 EVPLQ92817 2033 aa17.38■□□□□ 0.37
COL1A1-213ENST00000511732 RPLP2P05387 115 aaKnown RBP17.37■□□□□ 0.37
COL1A1-213ENST00000511732 ZNF746Q6NUN9 644 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-213ENST00000511732 TMEM192Q8IY95 271 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 BICD2Q8TD16 824 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 HLA-CQ95604 372 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 ZNF274Q96GC6 653 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-213ENST00000511732 SAMD11Q96NU1 681 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 CELF4Q9BZC1 486 aaKnown RBP17.37■□□□□ 0.37
COL1A1-213ENST00000511732 CDHR5Q9HBB8 845 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 PADI3Q9ULW8 664 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 MAFBQ9Y5Q3 323 aaPredicted RBP17.37■□□□□ 0.37
COL1A1-213ENST00000511732 IGSF9BQ9UPX0 1349 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 ATG2AQ2TAZ0 1938 aa17.37■□□□□ 0.37
COL1A1-213ENST00000511732 H3BNC9 293 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 NLRP5P59047 1200 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 SSRP1Q08945 709 aaKnown RBP17.36■□□□□ 0.37
COL1A1-213ENST00000511732 STK3Q13188 491 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 KIAA0319LQ8IZA0 1049 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 ZNF689Q96CS4 500 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-213ENST00000511732 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 TMX1Q9H3N1 280 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 KDM3AQ9Y4C1 1321 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 COL1A2P08123 1366 aa17.36■□□□□ 0.37
COL1A1-213ENST00000511732 M0QZ92 97 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 M0R2N6 131 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 MSH4O15457 936 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 NEFLP07196 543 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 KRT76Q01546 638 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 GPM6BQ13491 265 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 NPY5RQ15761 445 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 AAK1Q2M2I8 961 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 TMEM266Q2M3C6 531 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 ZNF484Q5JVG2 852 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 TRMT1LQ7Z2T5 733 aaKnown RBP17.35■□□□□ 0.37
COL1A1-213ENST00000511732 SMAP1Q8IYB5 467 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-213ENST00000511732 NME8Q8N427 588 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 FIBCD1Q8N539 461 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 IL27Q8NEV9 243 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 GJA10Q969M2 543 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 MRPL38Q96DV4 380 aaKnown RBP17.35■□□□□ 0.37
COL1A1-213ENST00000511732 GABBR1Q9UBS5 961 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 PCDHA4Q9UN74 947 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 PCDHA10Q9Y5I2 948 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 ADGRA3Q8IWK6 1321 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 KIAA1671Q9BY89 1806 aa17.35■□□□□ 0.37
COL1A1-213ENST00000511732 DTNBO60941 627 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms