RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 RPS6KA2Q15349 733 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 SURF1Q15526 300 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 SWSAP1Q6NVH7 229 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 OR6B3Q8NGW1 331 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 MXD3Q9BW11 206 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 EPB41L5Q9HCM4 733 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 ZNF302Q9NR11 478 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 TBC1D22BQ9NU19 505 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 NEXMIFQ5QGS0 1516 aa9.79□□□□□ -0.84
NEK1-207ENST00000511633 PGRMC1O00264 195 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 TDP2O95551 362 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 CHGBP05060 677 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ARL4AP40617 200 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ECE1P42892 770 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 TRIP13Q15645 432 aaPredicted RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 ZNF34Q8IZ26 560 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 RUNDC3BQ96NL0 473 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 MMP19Q99542 508 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 PLA2G12BQ9BX93 195 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 RPAP3Q9H6T3 665 aaPredicted RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 SMYD2Q9NRG4 433 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 PNPLA7Q6ZV29 1317 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 NOL3O60936 208 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 HEXIM1O94992 359 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 ADCY1Q08828 1119 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 COASYQ13057 564 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 KCTD16Q68DU8 428 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 TTC19Q6DKK2 380 aaPredicted RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 DARS2Q6PI48 645 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 GIMAP8Q8ND71 665 aaPredicted RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 GABBR1Q9UBS5 961 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 LRRD1A4D1F6 860 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 MCF2LO15068 1137 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 CLDN3O15551 220 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 GSTA1P08263 222 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 GSTA2P09210 222 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 CDO1Q16878 200 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 STOX1Q6ZVD7 989 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 CDKL2Q92772 493 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 IFT122Q9HBG6 1241 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 DAAM1Q9Y4D1 1078 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 DAGLAQ9Y4D2 1042 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 DIP2CQ9Y2E4 1556 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 PTPRMP28827 1452 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 KIF28PB7ZC32 967 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ORC4O43929 436 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 PRPSAP2O60256 369 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ECEL1O95672 775 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 NR3C1P04150 777 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ANXA13P27216 316 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 GBP1P32455 592 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 GUCY1A2P33402 732 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 HMGCS2P54868 508 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 PLTPP55058 493 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 TSTA3Q13630 321 aaPredicted RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 C12orf60Q5U649 245 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 MICALL2Q8IY33 904 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 CCDC170Q8IYT3 715 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ZNF579Q8NAF0 562 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 FAM20AQ96MK3 541 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 FAM213AQ9BRX8 229 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ADAMTS1Q9UHI8 967 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 SEC31AO94979 1220 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 ZNF18P17022 549 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 GARSP41250 739 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 RCAN1P53805 252 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 KRT76Q01546 638 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 NEDD1Q8NHV4 660 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 FAM167AQ96KS9 214 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 IPO11Q9UI26 975 aaKnown RBP9.78□□□□□ -0.84
NEK1-207ENST00000511633 INPP5FQ9Y2H2 1132 aa9.78□□□□□ -0.84
NEK1-207ENST00000511633 LMTK2Q8IWU2 1503 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 PFDN6O15212 129 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 PRCPP42785 496 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 GCLMP48507 274 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 BASP1P80723 227 aaKnown RBP9.77□□□□□ -0.84
NEK1-207ENST00000511633 MTMR2Q13614 643 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 RHPN2Q8IUC4 686 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 ARHGAP24Q8N264 748 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 MCPH1Q8NEM0 835 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 MTRQ99707 1265 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 ZWILCHQ9H900 591 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 SLC12A6Q9UHW9 1150 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 ANAPC5Q9UJX4 755 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 DNAJC12Q9UKB3 198 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 STK38LQ9Y2H1 464 aa9.77□□□□□ -0.84
NEK1-207ENST00000511633 EIF3CLB5ME19 914 aaKnown RBP9.77□□□□□ -0.85
NEK1-207ENST00000511633 LDHAP00338 332 aaKnown RBP9.77□□□□□ -0.85
NEK1-207ENST00000511633 INHBAP08476 426 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 PDE1BQ01064 536 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 MAPK6Q16659 721 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 CYP4F22Q6NT55 531 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 CACNA2D3Q8IZS8 1091 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 BBS5Q8N3I7 341 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 PANX2Q96RD6 677 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 CRAMP1Q96RY5 1269 aa9.77□□□□□ -0.85
NEK1-207ENST00000511633 EIF3CQ99613 913 aaKnown RBP9.77□□□□□ -0.85
NEK1-207ENST00000511633 RASSF4Q9H2L5 321 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms