RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 FAM109BQ6ICB4 259 aaPredicted RBP13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 OTOP2Q7RTS6 562 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 BBXQ8WY36 941 aaPredicted RBP13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 ZBTB10Q96DT7 871 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 MTMR9Q96QG7 549 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 GABBR1Q9UBS5 961 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 TUBE1Q9UJT0 475 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 PCDHA2Q9Y5H9 948 aa13.26□□□□□ -0.29
HMGXB3-203ENST00000510472 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 KIF28PB7ZC32 967 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 DLL1O00548 723 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 CHRNA1P02708 482 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 KLRC1P26715 233 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 MGAT3Q09327 533 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 UGCGQ16739 394 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 ZNF484Q5JVG2 852 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 MTHFD1LQ6UB35 978 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 NOSTRINQ8IVI9 506 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 TRAPPC12Q8WVT3 735 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
HMGXB3-203ENST00000510472 COL1A2P08123 1366 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 SMIM35A0A1B0GVV1 85 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 CHMP2AO43633 222 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 GJB2P29033 226 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 TOB1P50616 345 aaPredicted RBP13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 IGBP1P78318 339 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 TARBP2Q15633 366 aaKnown RBP13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 SLFN12Q8IYM2 578 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 KIAA0319LQ8IZA0 1049 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 DNAJB3Q8WWF6 145 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 NIFKQ9BYG3 293 aaKnown RBP13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 TMEM60Q9H2L4 133 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 TCEAL9Q9UHQ7 104 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 SAMM50Q9Y512 469 aa13.24□□□□□ -0.29
HMGXB3-203ENST00000510472 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 BAIAP3O94812 1187 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 C22orf31O95567 290 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 RPLP2P05387 115 aaKnown RBP13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 EPHA7Q15375 998 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 PLEKHG4Q58EX7 1191 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 NME8Q8N427 588 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 C4orf32Q8N8J7 132 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 DBF4BQ8NFT6 615 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 FAM167AQ96KS9 214 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 FTOQ9C0B1 505 aaKnown RBP eCLIP13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 NRBP2Q9NSY0 501 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 KIF3AQ9Y496 699 aa13.23□□□□□ -0.29
HMGXB3-203ENST00000510472 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 NEMFO60524 1076 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 BAG4O95429 457 aaKnown RBP13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 OATP04181 439 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 CTSHP09668 335 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 ACTN1P12814 892 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 PSMC5P62195 406 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 PRKCEQ02156 737 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 ORC2Q13416 577 aaPredicted RBP13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 CALCRLQ16602 461 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 XKR3Q5GH77 459 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 RSPH3Q86UC2 560 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 CKAP2LQ8IYA6 745 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 PHOSPHO2Q8TCD6 241 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 SNX21Q969T3 373 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 HSD17B14Q9BPX1 270 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 SMC3Q9UQE7 1217 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 SLC4A7Q9Y6M7 1214 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
HMGXB3-203ENST00000510472 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 MAGEB2O15479 319 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 SLITRK3O94933 977 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 P4HBP07237 508 aaKnown RBP13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 MCM7P33993 719 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 QARSP47897 775 aaKnown RBP13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 MRPS6P82932 125 aaKnown RBP13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 LPIN1Q14693 890 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 ZNF174Q15697 407 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 FBXO47Q5MNV8 452 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 ANO5Q75V66 913 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 C4orf19Q8IY42 314 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 PBX4Q9BYU1 374 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 TTC12Q9H892 705 aaPredicted RBP13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
HMGXB3-203ENST00000510472 TRIP12Q14669 1992 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms