RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TUBE1Q9UJT0 475 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 SAMM50Q9Y512 469 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 PCDHA10Q9Y5I2 948 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 NRCAMQ92823 1304 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 IGSF9BQ9UPX0 1349 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 CHD9Q3L8U1 2897 aa15.33■□□□□ 0.04
SNF8-206ENST00000509989 PSAPP07602 524 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 GJB2P29033 226 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 SPIRE1Q08AE8 756 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 MGAT3Q09327 533 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 TRIM29Q14134 588 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 PSRC1Q6PGN9 363 aaPredicted RBP15.32■□□□□ 0.04
SNF8-206ENST00000509989 MIER3Q7Z3K6 550 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 BANK1Q8NDB2 785 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 ATP8B4Q8TF62 1192 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 FTOQ9C0B1 505 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNF8-206ENST00000509989 TTYH1Q9H313 450 aaPredicted RBP15.32■□□□□ 0.04
SNF8-206ENST00000509989 CDHR5Q9HBB8 845 aa15.32■□□□□ 0.04
SNF8-206ENST00000509989 ZBBXA8MT70 800 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 WDR64B1ANS9 1081 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 RSPH10B2B2RC85 870 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 ARHGEF15O94989 841 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 CXCL10P02778 98 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 RSPH10BP0C881 870 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 KLRC1P26715 233 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
SNF8-206ENST00000509989 DEFB103AP81534 67 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 HMGN5P82970 282 aaKnown RBP15.31■□□□□ 0.04
SNF8-206ENST00000509989 FAM160B1Q5W0V3 765 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 MTHFD1LQ6UB35 978 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
SNF8-206ENST00000509989 RPUSD2Q8IZ73 545 aaKnown RBP15.31■□□□□ 0.04
SNF8-206ENST00000509989 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
SNF8-206ENST00000509989 FAM184AQ8NB25 1140 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 DBF4BQ8NFT6 615 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 PPP1R16BQ96T49 567 aa15.31■□□□□ 0.04
SNF8-206ENST00000509989 YBX2Q9Y2T7 364 aaKnown RBP15.31■□□□□ 0.04
SNF8-206ENST00000509989 A0A087WWV3 80 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 ZBTB39O15060 712 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 SLC34A2O95436 690 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 PRKCEQ02156 737 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 ZNF174Q15697 407 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 FAM26DQ5JW98 314 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNF8-206ENST00000509989 SPRED2Q7Z698 418 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 CKAP2LQ8IYA6 745 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 CEP89Q96ST8 783 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 PBX4Q9BYU1 374 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 BRMS1Q9HCU9 246 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
SNF8-206ENST00000509989 HBP1O60381 514 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 C22orf31O95567 290 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 GNAT1P11488 350 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 MCM7P33993 719 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 RFC2P35250 354 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
SNF8-206ENST00000509989 PLA2G4FQ68DD2 849 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 DEFB123Q8N688 67 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 ZNF668Q96K58 619 aaPredicted RBP15.29■□□□□ 0.04
SNF8-206ENST00000509989 MTMR9Q96QG7 549 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 AGO3Q9H9G7 860 aaKnown RBP15.29■□□□□ 0.04
SNF8-206ENST00000509989 RGL1Q9NZL6 768 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 PCDHA2Q9Y5H9 948 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 CDY2AQ9Y6F7 541 aa15.29■□□□□ 0.04
SNF8-206ENST00000509989 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
SNF8-206ENST00000509989 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
SNF8-206ENST00000509989 RRN3P2A6NIE6 340 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 OATP04181 439 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 GHRP10912 638 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 GCFC2P16383 781 aaKnown RBP15.28■□□□□ 0.04
SNF8-206ENST00000509989 TXKP42681 527 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 CLCN3P51790 818 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 JAK3P52333 1124 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 WDR5P61964 334 aaKnown RBP15.28■□□□□ 0.04
SNF8-206ENST00000509989 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
SNF8-206ENST00000509989 PPP2R5CQ13362 524 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 DRP2Q13474 957 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 CUL4AQ13619 759 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 LPIN1Q14693 890 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 PLEKHG4Q58EX7 1191 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 NCAPH2Q6IBW4 605 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 NOSTRINQ8IVI9 506 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 KIAA0319LQ8IZA0 1049 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 LRRC71Q8N4P6 559 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 BBXQ8WY36 941 aaPredicted RBP15.28■□□□□ 0.04
SNF8-206ENST00000509989 DYDC2Q96IM9 177 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 FAM20AQ96MK3 541 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 GUCD1Q96NT3 240 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 NKX2-4Q9H2Z4 354 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 FOXP1Q9H334 677 aaPredicted RBP15.28■□□□□ 0.04
SNF8-206ENST00000509989 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
SNF8-206ENST00000509989 CHD7Q9P2D1 2997 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 CDH23Q9H251 3354 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 POTEMA6NI47 508 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 VTNP04004 478 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 DNAJB2P25686 324 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 U2AF2P26368 475 aaKnown RBP eCLIP15.27■□□□□ 0.041e-6■□□□□ 9.6
SNF8-206ENST00000509989 SFNP31947 248 aa15.27■□□□□ 0.04
SNF8-206ENST00000509989 SLC26A2P50443 739 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms