RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	XRRA1	Q6P2D8	792 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	PADI6	Q6TGC4	694 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	HEATR3	Q7Z4Q2	680 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	CCDC148	Q8NFR7	591 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	BICD2	Q8TD16	824 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	PIBF1	Q8WXW3	757 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	PHKB	Q93100	1093 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	ZMYND12	Q9H0C1	365 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	ABHD16B	Q9H3Z7	469 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	IL21	Q9HBE4	155 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	RIC8A	Q9NPQ8	531 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	TLR9	Q9NR96	1032 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	FAM50B	Q9Y247	325 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	DNAH14	Q0VDD8	3507 aa		11.75	□□□□□ -0.53
PTPN20-222	ENST00000509774	SMCO2	A6NFE2	343 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	STXBP3	O00186	592 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	MEIS2	O14770	477 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	CYP2C9	P11712	490 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	CALML3	P27482	149 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	NAPA	P54920	295 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	PSMC6	P62333	389 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	CNTN2	Q02246	1040 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	COL19A1	Q14993	1142 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	WWC2	Q6AWC2	1192 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	CNTNAP3B	Q96NU0	1288 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	RMDN3	Q96TC7	470 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	CNTNAP3	Q9BZ76	1288 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	IRF2BPL	Q9H1B7	796 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	EHMT1	Q9H9B1	1298 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	C6orf50	Q9HD87	102 aa		11.74	□□□□□ -0.53
PTPN20-222	ENST00000509774	hCG_1642624	A0A1W2PR95	340 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	STAM2	O75886	525 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	CABYR	O75952	493 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	CTDNEP1	O95476	244 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	EDNRB	P24530	442 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	ALDH5A1	P51649	535 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	ARHGEF16	Q5VV41	709 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	MICAL3	Q7RTP6	2002 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	NECAB1	Q8N987	351 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	NSUN7	Q8NE18	718 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	SMARCC2	Q8TAQ2	1214 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	TBC1D5	Q92609	795 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	SNX21	Q969T3	373 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	PABPC5	Q96DU9	382 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	TAAR1	Q96RJ0	339 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	TGS1	Q96RS0	853 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	TRMT13	Q9NUP7	481 aa	Known RBP	11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	ORC3	Q9UBD5	711 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	KIF3A	Q9Y496	699 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	SCN10A	Q9Y5Y9	1956 aa		11.73	□□□□□ -0.53
PTPN20-222	ENST00000509774	CEP250	Q9BV73	2442 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	LINC01553	A4QN01	128 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	EIF3J	O75822	258 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	PTGS1	P23219	599 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	ADCY7	P51828	1080 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	AP3B2	Q13367	1082 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	SMAD2	Q15796	467 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	STXBP2	Q15833	593 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	IQSEC1	Q6DN90	963 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	SLC30A10	Q6XR72	485 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	NOL8	Q76FK4	1167 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	ARMCX2	Q7L311	632 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	VSIG10L	Q86VR7	867 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	MRPL38	Q96DV4	380 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	TMX3	Q96JJ7	454 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	FGD4	Q96M96	766 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	SEZ6L	Q9BYH1	1024 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	KATNBL1	Q9H079	304 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	VTA1	Q9NP79	307 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	PXMP2	Q9NR77	195 aa		11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.72	□□□□□ -0.53
PTPN20-222	ENST00000509774	SPTBN2	O15020	2390 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	FRMPD4	Q14CM0	1322 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	SPDYE3	A6NKU9	549 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	LARGE1	O95461	756 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	NR3C2	P08235	984 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	TGFB3	P10600	412 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	AVPR2	P30518	371 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	RFC2	P35250	354 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	LTBR	P36941	435 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	NBL1	P41271	181 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	CLK2	P49760	499 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	NLRP5	P59047	1200 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	WDR5	P61964	334 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	PDE4D	Q08499	809 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	FSCN1	Q16658	493 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	SWT1	Q5T5J6	900 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	KCNV1	Q6PIU1	500 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	USP17L6P	Q6QN14	398 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	EP400NL	Q6ZTU2	488 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	CCDC83	Q8IWF9	413 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	DAGLB	Q8NCG7	672 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	POP1	Q99575	1024 aa	Known RBP	11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	PDCD2L	Q9BRP1	358 aa		11.71	□□□□□ -0.53
PTPN20-222	ENST00000509774	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms