RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 LSM14BQ9BX40 385 aaKnown RBP16.41■□□□□ 0.22
PHF3-209ENST00000509330 EPC1Q9H2F5 836 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
PHF3-209ENST00000509330 ELP3Q9H9T3 547 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 PARVGQ9HBI0 331 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 GPRC5CQ9NQ84 441 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 JADE2Q9NQC1 790 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 AKAP3O75969 853 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 SLC35F6Q8N357 371 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 UBIAD1Q9Y5Z9 338 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 PHLPP2Q6ZVD8 1323 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 KIF5CO60282 957 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 HIP1RO75146 1068 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 ACTN1P12814 892 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 NPEPPSP55786 919 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 ZBED6P86452 979 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 SUPT20HL1Q3ZLR7 823 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 GADL1Q6ZQY3 521 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 FAM178BQ8IXR5 827 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.22
PHF3-209ENST00000509330 DCPSQ96C86 337 aaKnown RBP16.41■□□□□ 0.22
PHF3-209ENST00000509330 ASTN1O14525 1302 aa16.41■□□□□ 0.22
PHF3-209ENST00000509330 TISP43B9A030 160 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 CYP2J2P51589 502 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 C9orf131Q5VYM1 1079 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 PADI6Q6TGC4 694 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 ZNF397Q8NF99 534 aaPredicted RBP16.4■□□□□ 0.22
PHF3-209ENST00000509330 NEK11Q8NG66 645 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 SNCAIPQ9Y6H5 919 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 GOLGA6L9A6NEM1 432 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 SPDYE16A6NNV3 312 aaPredicted RBP16.4■□□□□ 0.22
PHF3-209ENST00000509330 KIF20AO95235 890 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 CCNE2O96020 404 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 NR3C2P08235 984 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 POLR2FP61218 127 aaKnown RBP16.4■□□□□ 0.22
PHF3-209ENST00000509330 FSTL1Q12841 308 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 RIT2Q99578 217 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 SYT17Q9BSW7 474 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 AFG3L2Q9Y4W6 797 aa16.4■□□□□ 0.22
PHF3-209ENST00000509330 NR3C1P04150 777 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 SOX10P56693 466 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 HERVK_113P62684 666 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 KCNH2Q12809 1159 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 HSP90AA2PQ14568 343 aaPredicted RBP16.39■□□□□ 0.21
PHF3-209ENST00000509330 B3GNT9Q6UX72 402 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 CATSPERGQ6ZRH7 1159 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 KIAA1328Q86T90 577 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 REPS2Q8NFH8 660 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 NUP58Q9BVL2 599 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 A1CFQ9NQ94 594 aaKnown RBP16.39■□□□□ 0.21
PHF3-209ENST00000509330 RCCD1A6NED2 376 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 ENC1O14682 589 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 ARHGAP25P42331 645 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 EPM2AIP1Q7L775 607 aaPredicted RBP16.39■□□□□ 0.21
PHF3-209ENST00000509330 TRIM59Q8IWR1 403 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 MNS1Q8NEH6 495 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 DEF6Q9H4E7 631 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 STK24Q9Y6E0 443 aa16.39■□□□□ 0.21
PHF3-209ENST00000509330 FECHP22830 423 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 CNTN2Q02246 1040 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 TDRD12Q587J7 1177 aaKnown RBP16.38■□□□□ 0.21
PHF3-209ENST00000509330 R3HDMLQ9H3Y0 253 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 L2HGDHQ9H9P8 463 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 DOCK1Q14185 1865 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 MACROD2A1Z1Q3 448 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 K7ENM7 598 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 TGFB1I1O43294 461 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 P4HBP07237 508 aaKnown RBP16.38■□□□□ 0.21
PHF3-209ENST00000509330 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
PHF3-209ENST00000509330 DAW1Q8N136 415 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 CCDC42Q96M95 316 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 CEP63Q96MT8 703 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 TEX13BQ9BXU2 312 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 LACRTQ9GZZ8 138 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 ARHGAP20Q9P2F6 1191 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 ARMCX3Q9UH62 379 aaPredicted RBP16.38■□□□□ 0.21
PHF3-209ENST00000509330 FRMPD4Q14CM0 1322 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 BACH1O14867 736 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 CALUO43852 315 aaPredicted RBP16.38■□□□□ 0.21
PHF3-209ENST00000509330 SLC9A1P19634 815 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 YWHABP31946 246 aaKnown RBP16.38■□□□□ 0.21
PHF3-209ENST00000509330 CCDC122Q5T0U0 273 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 EEPD1Q7L9B9 569 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 SYCP3Q8IZU3 236 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 PCIF1Q9H4Z3 704 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
PHF3-209ENST00000509330 GINM1Q9NU53 330 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 CSADQ9Y600 493 aa16.38■□□□□ 0.21
PHF3-209ENST00000509330 C19orf81C9J6K1 198 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 IRF6O14896 467 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 QARSP47897 775 aaKnown RBP16.37■□□□□ 0.21
PHF3-209ENST00000509330 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
PHF3-209ENST00000509330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.213e-8■■■■■ 74.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms