RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, human

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF4-211	ENST00000509206	PRKAB2	O43741	272 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	CAND2	O75155	1236 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SURF6	O75683	361 aa	Known RBP	4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	MBD4	O95243	580 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	TTLL1	O95922	423 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	DCN	P07585	359 aa	Known RBP	4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	FBXO45	P0C2W1	286 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	PDE6A	P16499	860 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	MCC	P23508	829 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	CTH	P32929	405 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	UBE3A	Q05086	875 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	LAMC2	Q13753	1193 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	LY6K	Q17RY6	165 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	MSS51	Q4VC12	460 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	PLPP4	Q5VZY2	271 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	XRRA1	Q6P2D8	792 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SYCE2	Q6PIF2	218 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	LRSAM1	Q6UWE0	723 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	OTOP3	Q7RTS5	596 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	RSPH3	Q86UC2	560 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SERINC5	Q86VE9	423 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	CMTR2	Q8IYT2	770 aa	Known RBP	4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	LCORL	Q8N3X6	602 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SUMF1	Q8NBK3	374 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SSH1	Q8WYL5	1049 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	WNT8B	Q93098	351 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SPSB2	Q99619	263 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	GPR20	Q99678	358 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	API5	Q9BZZ5	524 aa	Known RBP	4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	POMK	Q9H5K3	350 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	ANTXR1	Q9H6X2	564 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	ANKFY1	Q9P2R3	1169 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	TFIP11	Q9UBB9	837 aa	Known RBP	4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	ZMIZ1	Q9ULJ6	1067 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	CA14	Q9ULX7	337 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	MTMR7	Q9Y216	660 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SIT1	Q9Y3P8	196 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	MRPL42	Q9Y6G3	142 aa	Known RBP	4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	SLC4A4	Q9Y6R1	1079 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	DMXL1	Q9Y485	3027 aa		4.54	□□□□□ -1.68
RNF4-211	ENST00000509206	MYO10	Q9HD67	2058 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	MICAL3	Q7RTP6	2002 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	PTPRS	Q13332	1948 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	TBC1D4	O60343	1298 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	PPFIA4	O75335	1185 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	DGKI	O75912	1065 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	ARIH2	O95376	493 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	GNAI2	P04899	355 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	ICAM1	P05362	532 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	WEE2	P0C1S8	567 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	CCNYL3	P0C7X3	344 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	ZNF286B	P0CG31	522 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	TSPY3	P0CV98	308 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	TSPY8	P0CW00	308 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	GHR	P10912	638 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	KRT17	Q04695	432 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	CSTF1	Q05048	431 aa	Known RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	STXBP2	Q15833	593 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	CCDC96	Q2M329	555 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	RARS2	Q5T160	578 aa	Known RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	TMEM184A	Q6ZMB5	413 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	KCTD1	Q719H9	257 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	TMC7	Q7Z402	723 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	FAM160A2	Q8N612	972 aa	Predicted RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	GMCL1P1	Q8NEA9	526 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	DNER	Q8NFT8	737 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	VN1R2	Q8NFZ6	395 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	MKL1	Q969V6	931 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	DNAJC2	Q99543	621 aa	Known RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	MEIS3	Q99687	375 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	BCO2	Q9BYV7	579 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	BCL11A	Q9H165	835 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	TBC1D17	Q9HA65	648 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	NGRN	Q9NPE2	291 aa	Known RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	WNT16	Q9UBV4	365 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	PNMA2	Q9UL42	364 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	PRR12	Q9ULL5	1215 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	DUSP12	Q9UNI6	340 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	SMG5	Q9UPR3	1016 aa	Known RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	UST	Q9Y2C2	406 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	MRVI1	Q9Y6F6	885 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	TANC1	Q9C0D5	1861 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	FLNB	O75369	2602 aa	Known RBP	4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	USP24	Q9UPU5	2620 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	SCN10A	Q9Y5Y9	1956 aa		4.53	□□□□□ -1.68
RNF4-211	ENST00000509206	RBAK-RBAKDN	I3L0D1	243 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	GOLIM4	O00461	696 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	TREH	O43280	583 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	ATP9B	O43861	1147 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	SORBS3	O60504	671 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	FGF18	O76093	207 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	DXO	O77932	396 aa	Known RBP	4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	EOMES	O95936	686 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	ADH1B	P00325	375 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	F2	P00734	622 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	SLC3A2	P08195	630 aa	Known RBP	4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	LINC00271	P0C7V0	271 aa		4.52	□□□□□ -1.69
RNF4-211	ENST00000509206	RASA1	P20936	1047 aa		4.52	□□□□□ -1.69

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