RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 KIF5BP33176 963 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 COASYQ13057 564 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 IER5LQ5T953 404 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 BMP8AQ7Z5Y6 402 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
CXCL1-202ENST00000509101 RUFY2Q8WXA3 655 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 PBXIP1Q96AQ6 731 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 PCYT2Q99447 389 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 MAP3K14Q99558 947 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 PSTPIP2Q9H939 334 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 LOC730098B7Z3J9 87 aa18.33■□□□□ 0.52
CXCL1-202ENST00000509101 PPFIA3O75145 1194 aa18.33■□□□□ 0.52
CXCL1-202ENST00000509101 PTPN5P54829 565 aa18.33■□□□□ 0.52
CXCL1-202ENST00000509101 ZXDAP98168 799 aa18.33■□□□□ 0.52
CXCL1-202ENST00000509101 SUGP1Q8IWZ8 645 aaKnown RBP18.33■□□□□ 0.52
CXCL1-202ENST00000509101 AZI2Q9H6S1 392 aa18.33■□□□□ 0.52
CXCL1-202ENST00000509101 JPH1Q9HDC5 661 aaPredicted RBP18.33■□□□□ 0.52
CXCL1-202ENST00000509101 LRFN2Q9ULH4 789 aa18.33■□□□□ 0.52
CXCL1-202ENST00000509101 SQORQ9Y6N5 450 aa18.33■□□□□ 0.52
CXCL1-202ENST00000509101 SPDYE3A6NKU9 549 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 RXRAP19793 462 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 PDE4AP27815 886 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 TMEM266Q2M3C6 531 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 SRBD1Q8N5C6 995 aaKnown RBP18.32■□□□□ 0.52
CXCL1-202ENST00000509101 EXOC6Q8TAG9 804 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 LZTS2Q9BRK4 669 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
CXCL1-202ENST00000509101 JADE2Q9NQC1 790 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 SLC9A2Q9UBY0 812 aa18.32■□□□□ 0.52
CXCL1-202ENST00000509101 hCG_1642624A0A1W2PR95 340 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 CHMLP26374 656 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 SMARCA1P28370 1054 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
CXCL1-202ENST00000509101 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
CXCL1-202ENST00000509101 PLCB4Q15147 1175 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 SPOUT1Q5T280 376 aaKnown RBP18.31■□□□□ 0.52
CXCL1-202ENST00000509101 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 RPGRIP1Q96KN7 1286 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 PHF7Q9BWX1 381 aaPredicted RBP18.31■□□□□ 0.52
CXCL1-202ENST00000509101 TMX1Q9H3N1 280 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 TLE6Q9H808 572 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 PCDHA2Q9Y5H9 948 aa18.31■□□□□ 0.52
CXCL1-202ENST00000509101 PER2O15055 1255 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 GNAQP50148 359 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 KRT76Q01546 638 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 TCF15Q12870 199 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 RAB11FIP4Q86YS3 637 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 FBXL6Q8N531 539 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 MICAL1Q8TDZ2 1067 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 HCSTQ9UBK5 93 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 GINS2Q9Y248 185 aa18.3■□□□□ 0.52
CXCL1-202ENST00000509101 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 SMIM35A0A1B0GVV1 85 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 CCDC69A6NI79 296 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 PRC1O43663 620 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 MGEA5O60502 916 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 SARSP49591 514 aaKnown RBP18.29■□□□□ 0.52
CXCL1-202ENST00000509101 ACTR2P61160 394 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 NFX1Q12986 1120 aaKnown RBP18.29■□□□□ 0.52
CXCL1-202ENST00000509101 PKN1Q16512 942 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 VN1R2Q8NFZ6 395 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
CXCL1-202ENST00000509101 TLR9Q9NR96 1032 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 KCNH7Q9NS40 1196 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 PCDHB12Q9Y5F1 795 aa18.29■□□□□ 0.52
CXCL1-202ENST00000509101 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
CXCL1-202ENST00000509101 MYH9P35579 1960 aaKnown RBP18.29■□□□□ 0.52
CXCL1-202ENST00000509101 TBKBP1A7MCY6 615 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 SH2B2O14492 632 aaPredicted RBP18.28■□□□□ 0.52
CXCL1-202ENST00000509101 MAFGO15525 162 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 SGSM2O43147 1006 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 STAT5BP51692 787 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 UBE3AQ05086 875 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 SIGLEC14Q08ET2 396 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 MTHFD1LQ6UB35 978 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 HEATR3Q7Z4Q2 680 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 CCDC82Q8N4S0 544 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 CYP2W1Q8TAV3 490 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 PRRX2Q99811 253 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 MXRA8Q9BRK3 442 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 SDF4Q9BRK5 362 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 FAM86C1Q9NVL1 165 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 PCDHB7Q9Y5E2 793 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 CACNA1HO95180 2353 aa18.28■□□□□ 0.52
CXCL1-202ENST00000509101 WDR81Q562E7 1941 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 NFASCO94856 1347 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 PLXNA3P51805 1871 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 DENND3A2RUS2 1198 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 FGF18O76093 207 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 VCPP55072 806 aaKnown RBP18.27■□□□□ 0.52
CXCL1-202ENST00000509101 DUSP6Q16828 381 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 PLPPR4Q7Z2D5 763 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 THNSL1Q8IYQ7 743 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 ATP8B4Q8TF62 1192 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 SUSD6Q92537 303 aa18.27■□□□□ 0.52
CXCL1-202ENST00000509101 PGBD1Q96JS3 809 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms