RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CCDC155Q8N6L0 562 aa20.53■□□□□ 0.88
CLDND1-220ENST00000508902 TMEM60Q9H2L4 133 aa20.53■□□□□ 0.88
CLDND1-220ENST00000508902 WRAP73Q9P2S5 460 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-220ENST00000508902 COL6A3P12111 3177 aa20.53■□□□□ 0.88
CLDND1-220ENST00000508902 ARID2Q68CP9 1835 aa20.53■□□□□ 0.88
CLDND1-220ENST00000508902 TMEM150BA6NC51 233 aa20.52■□□□□ 0.88
CLDND1-220ENST00000508902 CHRNA1P02708 482 aa20.52■□□□□ 0.88
CLDND1-220ENST00000508902 GCFC2P16383 781 aaKnown RBP20.52■□□□□ 0.88
CLDND1-220ENST00000508902 PBX2P40425 430 aa20.52■□□□□ 0.88
CLDND1-220ENST00000508902 TRIM29Q14134 588 aa20.52■□□□□ 0.88
CLDND1-220ENST00000508902 RPAINQ86UA6 219 aa20.52■□□□□ 0.88
CLDND1-220ENST00000508902 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
CLDND1-220ENST00000508902 PSAPP07602 524 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 GNAT1P11488 350 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 GJB2P29033 226 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 SLC26A2P50443 739 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 PPP2R5CQ13362 524 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 CUL4AQ13619 759 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 NBR1Q14596 966 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 FAM26DQ5JW98 314 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 FAM160B1Q5W0V3 765 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 DNAJB3Q8WWF6 145 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 CEP89Q96ST8 783 aa20.51■□□□□ 0.87
CLDND1-220ENST00000508902 EYSQ5T1H1 3165 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 RSPH10B2B2RC85 870 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 HBP1O60381 514 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 PFKMP08237 780 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 RSPH10BP0C881 870 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 JAK3P52333 1124 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 SMAD3P84022 425 aaKnown RBP20.5■□□□□ 0.87
CLDND1-220ENST00000508902 PRKCEQ02156 737 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 TRMT1LQ7Z2T5 733 aaKnown RBP20.5■□□□□ 0.87
CLDND1-220ENST00000508902 MIER3Q7Z3K6 550 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 RPUSD2Q8IZ73 545 aaKnown RBP20.5■□□□□ 0.87
CLDND1-220ENST00000508902 MTMR9Q96QG7 549 aa20.5■□□□□ 0.87
CLDND1-220ENST00000508902 TTYH1Q9H313 450 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-220ENST00000508902 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-220ENST00000508902 RRN3P2A6NIE6 340 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 C22orf31O95567 290 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 MCM2P49736 904 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 TOB1P50616 345 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-220ENST00000508902 TMCO2Q7Z6W1 182 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-220ENST00000508902 LINC01465Q8N7H1 131 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 FAM184AQ8NB25 1140 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 FAM20AQ96MK3 541 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 FAM49AQ9H0Q0 323 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-220ENST00000508902 SAMM50Q9Y512 469 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 PCDHA2Q9Y5H9 948 aa20.49■□□□□ 0.87
CLDND1-220ENST00000508902 COL1A2P08123 1366 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 TBX3O15119 743 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 CAND2O75155 1236 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 OATP04181 439 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 U2AF2P26368 475 aaKnown RBP eCLIP20.48■□□□□ 0.871e-8■■□□□ 13.8
CLDND1-220ENST00000508902 KLRC1P26715 233 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 SFNP31947 248 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 DEFB103AP81534 67 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 TAF2Q6P1X5 1199 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 NOSTRINQ8IVI9 506 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 BANK1Q8NDB2 785 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 IL27Q8NEV9 243 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 DBF4BQ8NFT6 615 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 RDM1Q8NG50 284 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 BBXQ8WY36 941 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-220ENST00000508902 SH2D3AQ9BRG2 576 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 PBX4Q9BYU1 374 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.87
CLDND1-220ENST00000508902 YBX2Q9Y2T7 364 aaKnown RBP20.48■□□□□ 0.87
CLDND1-220ENST00000508902 TRANK1O15050 2925 aa20.48■□□□□ 0.87
CLDND1-220ENST00000508902 ARHGEF15O94989 841 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 MYOGP15173 224 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 ATP2B1P20020 1258 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 RABGGTBP53611 331 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 TMEM62Q0P6H9 643 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 TARBP2Q15633 366 aaKnown RBP20.47■□□□□ 0.87
CLDND1-220ENST00000508902 PLEKHG4Q58EX7 1191 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 GPR153Q6NV75 609 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 CNKSR3Q6P9H4 555 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 KIAA0319LQ8IZA0 1049 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 CDY2AQ9Y6F7 541 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 COL4A6Q14031 1691 aa20.47■□□□□ 0.87
CLDND1-220ENST00000508902 MYO9BQ13459 2157 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-220ENST00000508902 SMIM35A0A1B0GVV1 85 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-220ENST00000508902 ZBBXA8MT70 800 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 NEMFO60524 1076 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 GHRP10912 638 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 DNAJB2P25686 324 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 MCM7P33993 719 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 WDR5P61964 334 aaKnown RBP20.46■□□□□ 0.87
CLDND1-220ENST00000508902 MRPS6P82932 125 aaKnown RBP20.46■□□□□ 0.87
CLDND1-220ENST00000508902 LPIN1Q14693 890 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 SAFBQ15424 915 aaKnown RBP eCLIP20.46■□□□□ 0.87
CLDND1-220ENST00000508902 ZNF484Q5JVG2 852 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 CKAP2LQ8IYA6 745 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 C4orf32Q8N8J7 132 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 AGO3Q9H9G7 860 aaKnown RBP20.46■□□□□ 0.87
CLDND1-220ENST00000508902 CDHR5Q9HBB8 845 aa20.46■□□□□ 0.87
CLDND1-220ENST00000508902 RGL1Q9NZL6 768 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms