RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 FAM237AA0A1B0GTK4 181 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 A6NJR5 290 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 TRAK2O60296 914 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 LGALS2P05162 132 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 SPATA31C1P0DKV0 1188 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 SLC26A2P50443 739 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 GJA9P57773 515 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 XKR9Q5GH70 373 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 XKR3Q5GH77 459 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 HYIQ5T013 277 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 PLPPR4Q7Z2D5 763 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 C4orf19Q8IY42 314 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 FMR1NBQ8N0W7 255 aaPredicted RBP12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 KCTD17Q8N5Z5 321 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 PCSK9Q8NBP7 692 aaKnown RBP12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 ARRDC4Q8NCT1 418 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 LARP4BQ92615 738 aaKnown RBP12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 RAD54LQ92698 747 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 PNMA5Q96PV4 448 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 MAGEF1Q9HAY2 307 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 ERAP1Q9NZ08 941 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 TELO2Q9Y4R8 837 aa12.31□□□□□ -0.44
BRCC3P1-201ENST00000508559 PCNTO95613 3336 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 A0A087WWV3 80 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 A0A087X0B3 334 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 KBTBD13C9JR72 458 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 E9PMD0 336 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 LGR5O75473 907 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 EYA4O95677 639 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 OATP04181 439 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 SLFN14P0C7P3 912 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 PLA2G4BP0C869 781 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 YWHABP31946 246 aaKnown RBP12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 AFMP43652 599 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 MCM6Q14566 821 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 UGCGQ16739 394 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 LONRF3Q496Y0 759 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 GPT2Q8TD30 523 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 CEP170P1Q96L14 293 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 DEFB118Q96PH6 123 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 KATNAL1Q9BW62 490 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 UPF3AQ9H1J1 476 aaKnown RBP12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 ANKEF1Q9NU02 776 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 EMSYQ7Z589 1322 aa12.3□□□□□ -0.44
BRCC3P1-201ENST00000508559 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 IGKV6D-21A0A0A0MT36 114 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 H3BRB1 525 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 LYPLA2O95372 231 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 TFRCP02786 760 aaKnown RBP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 MTFR1Q15390 333 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 CAMK4Q16566 473 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 ECM1Q16610 540 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 KLHL40Q2TBA0 621 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 MTERF2Q49AM1 385 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 CAVIN1Q6NZI2 390 aaKnown RBP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 GPBP1Q86WP2 473 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 ENGASEQ8NFI3 743 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 AFAP1L1Q8TED9 768 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 CCDC47Q96A33 483 aaKnown RBP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 TIGD1Q96MW7 591 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 TNMDQ9H2S6 317 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 TUT1Q9H6E5 874 aaKnown RBP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 MAFBQ9Y5Q3 323 aaPredicted RBP12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
BRCC3P1-201ENST00000508559 MYADML2A6NDP7 307 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 CTAGE5O15320 804 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 ZNF862O60290 1169 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 HBP1O60381 514 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 SMC2O95347 1197 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 PSEN2P49810 448 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 PSMC6P62333 389 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 IGBP1P78318 339 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 MFSD10Q14728 455 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 PLCB4Q15147 1175 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 LRRC41Q15345 812 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 KCNA10Q16322 511 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 CCDC183Q5T5S1 534 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 PLA2G4FQ68DD2 849 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 KCNK18Q7Z418 384 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 STAMQ92783 540 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 PCYT2Q99447 389 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 MCOLN1Q9GZU1 580 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 CLSTN2Q9H4D0 955 aa12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
BRCC3P1-201ENST00000508559 DBR1Q9UK59 544 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms