RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ELOA2Q8IYF1 753 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 WWP1Q9H0M0 922 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 SEPT3Q9UH03 358 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 TUBE1Q9UJT0 475 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 NIP7Q9Y221 180 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 SAMD9Q5K651 1589 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 EIF4E1BA6NMX2 242 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 H7C0C1 242 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 FSBPO95073 299 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 APOA1P02647 267 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 TNNI1P19237 187 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 ATP5OP48047 213 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 RCAN1P53805 252 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 MTF1Q14872 753 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 OLFML2BQ68BL8 750 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 RSRC2Q7L4I2 434 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 NUDCD3Q8IVD9 361 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 RIN2Q8WYP3 895 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 DPF2Q92785 391 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 POLR3CQ9BUI4 534 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 SAYSD1Q9NPB0 183 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 CFAP69A5D8W1 941 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 BACH1O14867 736 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 CFLARO15519 480 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 RPS6KA5O75582 802 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT38O76015 456 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 PSMC1P62191 440 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 SYDE1Q6ZW31 735 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 RDH13Q8NBN7 331 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 DDI1Q8WTU0 396 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 DDX47Q9H0S4 455 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 ASXL2Q76L83 1435 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 HIBADHP31937 336 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 PPP2R5DQ14738 602 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 PNMA1Q8ND90 353 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 TTC17Q96AE7 1141 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 FAM129AQ9BZQ8 928 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 WARS2Q9UGM6 360 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 ARHGAP26Q9UNA1 814 aa7.85□□□□□ -1.15
UBE2D3-224ENST00000508474 KIAA0556O60303 1618 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 DAB1O75553 588 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT1P04264 644 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 NR5A1Q13285 461 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 RFX6Q8HWS3 928 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 KSR1Q8IVT5 923 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 SLC26A7Q8TE54 656 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 FAM89AQ96GI7 184 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 SNF8Q96H20 258 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 NAF1Q96HR8 494 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 ISCUQ9H1K1 167 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 ANKFY1Q9P2R3 1169 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 O00370 1275 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 WDR46O15213 610 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 NCK2O43639 380 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT4P19013 534 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 ECE1P42892 770 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 GFPT1Q06210 699 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 BSPRYQ5W0U4 402 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 TTBK2Q6IQ55 1244 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 UNC13DQ70J99 1090 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 RAB44Q7Z6P3 723 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 TPH2Q8IWU9 490 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 MSL3Q8N5Y2 521 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 SPDYE1Q8NFV5 336 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 MIEF2Q96C03 454 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 TRPV6Q9H1D0 765 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 EMILIN3Q9NT22 766 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 PFASO15067 1338 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 PVALEFA0A1B0GWK0 134 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 SSU72P8A0A1W2PR75 194 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 H3BQF6 201 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 K7ENM7 598 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 ATP6V1G2O95670 118 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT8P05787 483 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 HSPA13P48723 471 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 SEC24CP53992 1094 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 CEP55Q53EZ4 464 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 RBM43Q6ZSC3 357 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 TRIM50Q86XT4 487 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 RNF169Q8NCN4 708 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 HIPK4Q8NE63 616 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 TTC16Q8NEE8 873 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 GIPC2Q8TF65 315 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 PRPF31Q8WWY3 499 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 EEF2KMTQ96G04 330 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 PNKPQ96T60 521 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 MTA3Q9BTC8 594 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 IRX2Q9BZI1 471 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 SMYD3Q9H7B4 428 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 SH3GLB2Q9NR46 395 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 KCND1Q9NSA2 647 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 GID8Q9NWU2 228 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 RGL1Q9NZL6 768 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 RAB21Q9UL25 225 aa7.84□□□□□ -1.15
UBE2D3-224ENST00000508474 M0R2C6 588 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 STRNO43815 780 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PDE5AO76074 875 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 MAP3K7CLP57077 242 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 CUL4BQ13620 913 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms