RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 CCDC85BQ15834 202 aaPredicted RBP25.15■■□□□ 1.62
SNCB-204ENST00000508006 OTOP2Q7RTS6 562 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 ATXN2LQ8WWM7 1075 aaKnown RBP25.15■■□□□ 1.62
SNCB-204ENST00000508006 RAB34Q9BZG1 259 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 UNC45AQ9H3U1 944 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 CFAP45Q9UL16 551 aa25.15■■□□□ 1.62
SNCB-204ENST00000508006 LGR5O75473 907 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 F2P00734 622 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 MYL3P08590 195 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 SUPT20HL2P0C7V6 817 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 NASPP49321 788 aaPredicted RBP25.14■■□□□ 1.62
SNCB-204ENST00000508006 SLC26A2P50443 739 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 SP4Q02446 784 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 SPIRE1Q08AE8 756 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 FOXD4L5Q5VV16 416 aaPredicted RBP25.14■■□□□ 1.62
SNCB-204ENST00000508006 FAM173BQ6P4H8 233 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 PLPPR4Q7Z2D5 763 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 RPUSD2Q8IZ73 545 aaKnown RBP25.14■■□□□ 1.62
SNCB-204ENST00000508006 FOXD4L4Q8WXT5 416 aaPredicted RBP25.14■■□□□ 1.62
SNCB-204ENST00000508006 SMARCAD1Q9H4L7 1026 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 AZI2Q9H6S1 392 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 DISC1Q9NRI5 854 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 ZNF215Q9UL58 517 aaPredicted RBP25.14■■□□□ 1.62
SNCB-204ENST00000508006 SAMM50Q9Y512 469 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 STK24Q9Y6E0 443 aa25.14■■□□□ 1.62
SNCB-204ENST00000508006 MYH9P35579 1960 aaKnown RBP25.13■■□□□ 1.61
SNCB-204ENST00000508006 SCN10AQ9Y5Y9 1956 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 LGALS2P05162 132 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 FAM160B1Q5W0V3 765 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 DTHD1Q6ZMT9 781 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 MIER3Q7Z3K6 550 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 SLC43A3Q8NBI5 491 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 AFAP1L1Q8TED9 768 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 GJA10Q969M2 543 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 UIMC1Q96RL1 719 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 C16orf70Q9BSU1 422 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 NKX2-4Q9H2Z4 354 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 CXXC1Q9P0U4 656 aaPredicted RBP25.13■■□□□ 1.61
SNCB-204ENST00000508006 THEGQ9P2T0 379 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 CLIC4Q9Y696 253 aa25.13■■□□□ 1.61
SNCB-204ENST00000508006 H3BRB1 525 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 YEATS4O95619 227 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 SLC39A14Q15043 492 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 PTPAQ15257 358 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 TNPO1Q92973 898 aaKnown RBP25.12■■□□□ 1.61
SNCB-204ENST00000508006 USP28Q96RU2 1077 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 TRPV6Q9H1D0 765 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 TUT1Q9H6E5 874 aaKnown RBP25.12■■□□□ 1.61
SNCB-204ENST00000508006 ERAP1Q9NZ08 941 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 CHMP5Q9NZZ3 219 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 UMODL1Q5DID0 1318 aa25.12■■□□□ 1.61
SNCB-204ENST00000508006 HAS3O00219 553 aa25.11■■□□□ 1.61
SNCB-204ENST00000508006 TECP42680 631 aa25.11■■□□□ 1.61
SNCB-204ENST00000508006 EPHA7Q15375 998 aa25.11■■□□□ 1.61
SNCB-204ENST00000508006 IGSF22Q8N9C0 903 aa25.11■■□□□ 1.61
SNCB-204ENST00000508006 NEK9Q8TD19 979 aa25.11■■□□□ 1.61
SNCB-204ENST00000508006 SLC4A7Q9Y6M7 1214 aa25.11■■□□□ 1.61
SNCB-204ENST00000508006 TTC28Q96AY4 2481 aa25.11■■□□□ 1.61
SNCB-204ENST00000508006 CHMP2AO43633 222 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 B4GALT4O60513 344 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 DKC1O60832 514 aaKnown RBP eCLIP25.1■■□□□ 1.61
SNCB-204ENST00000508006 STAT5BP51692 787 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 PSMC6P62333 389 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 KAT2BQ92831 832 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 GLG1Q92896 1179 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 ASB2Q96Q27 587 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 TSPYL2Q9H2G4 693 aaPredicted RBP25.1■■□□□ 1.61
SNCB-204ENST00000508006 ZNF302Q9NR11 478 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 TELO2Q9Y4R8 837 aa25.1■■□□□ 1.61
SNCB-204ENST00000508006 MAFBQ9Y5Q3 323 aaPredicted RBP25.1■■□□□ 1.61
SNCB-204ENST00000508006 ZBBXA8MT70 800 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 BACH1O14867 736 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 ZNF286BP0CG31 522 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 KRT85P78386 507 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 MRPS5P82675 430 aaKnown RBP25.09■■□□□ 1.61
SNCB-204ENST00000508006 PTPN11Q06124 597 aaPredicted RBP25.09■■□□□ 1.61
SNCB-204ENST00000508006 NCAPH2Q6IBW4 605 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 SWSAP1Q6NVH7 229 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 LINC00301Q8NCQ3 95 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 ERMNQ8TAM6 284 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 ATP6V0A1Q93050 837 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 AK8Q96MA6 479 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 PCYT2Q99447 389 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 NOC4LQ9BVI4 516 aaKnown RBP25.09■■□□□ 1.61
SNCB-204ENST00000508006 GRIN2DO15399 1336 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 IGSF9BQ9UPX0 1349 aa25.09■■□□□ 1.61
SNCB-204ENST00000508006 EML1O00423 815 aa25.08■■□□□ 1.61
SNCB-204ENST00000508006 PPP6R2O75170 966 aa25.08■■□□□ 1.61
SNCB-204ENST00000508006 P4HBP07237 508 aaKnown RBP25.08■■□□□ 1.61
SNCB-204ENST00000508006 PSEN2P49810 448 aa25.08■■□□□ 1.61
SNCB-204ENST00000508006 ADGRE1Q14246 886 aa25.08■■□□□ 1.61
SNCB-204ENST00000508006 MFSD10Q14728 455 aa25.08■■□□□ 1.61
SNCB-204ENST00000508006 UTP14CQ5TAP6 766 aaKnown RBP25.08■■□□□ 1.61
SNCB-204ENST00000508006 NFRKBQ6P4R8 1299 aa25.08■■□□□ 1.61
SNCB-204ENST00000508006 CCDC60Q8IWA6 550 aaPredicted RBP25.08■■□□□ 1.61
SNCB-204ENST00000508006 FTOQ9C0B1 505 aaKnown RBP eCLIP25.08■■□□□ 1.61
SNCB-204ENST00000508006 TFIP11Q9UBB9 837 aaKnown RBP25.08■■□□□ 1.61
SNCB-204ENST00000508006 LRWD1Q9UFC0 647 aa25.08■■□□□ 1.61
SNCB-204ENST00000508006 MUTP22033 750 aa25.07■■□□□ 1.6
SNCB-204ENST00000508006 LONP1P36776 959 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms