RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 KRT23Q9C075 422 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 NAPBQ9H115 298 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 VTA1Q9NP79 307 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 WTIPA6NIX2 430 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-206ENST00000507875 RGS20O76081 388 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 BAG4O95429 457 aaKnown RBP8.09□□□□□ -1.11
CLCN3-206ENST00000507875 TRDNQ13061 729 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 CUL4AQ13619 759 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 L1TD1Q5T7N2 865 aaKnown RBP8.09□□□□□ -1.11
CLCN3-206ENST00000507875 DHX32Q7L7V1 743 aaKnown RBP8.09□□□□□ -1.11
CLCN3-206ENST00000507875 RPAINQ86UA6 219 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 SLC7A14Q8TBB6 771 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 SLC7A3Q8WY07 619 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 AGXT2Q9BYV1 514 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 JADE2Q9NQC1 790 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 PDRG1Q9NUG6 133 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 FEZ2Q9UHY8 353 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-206ENST00000507875 E7EWF7 191 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 NEMP1O14524 444 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 FOXP2O15409 715 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 GPR39O43194 453 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 PPIP5K2O43314 1243 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 NFKB1P19838 968 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 CASTP20810 708 aaKnown RBP8.08□□□□□ -1.12
CLCN3-206ENST00000507875 IARSP41252 1262 aaKnown RBP8.08□□□□□ -1.12
CLCN3-206ENST00000507875 PKP1Q13835 747 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 ZRSR2Q15696 482 aaKnown RBP8.08□□□□□ -1.12
CLCN3-206ENST00000507875 INO80DQ53TQ3 878 aaPredicted RBP8.08□□□□□ -1.12
CLCN3-206ENST00000507875 CCDC178Q5BJE1 867 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 DACT2Q5SW24 774 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 TCEAL8Q8IYN2 117 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 LCORLQ8N3X6 602 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 SMC1BQ8NDV3 1235 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 PARD3BQ8TEW8 1205 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 USP33Q8TEY7 942 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 RUSC1Q9BVN2 902 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 RASSF4Q9H2L5 321 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 ARMT1Q9H993 441 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 ZNF287Q9HBT7 754 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 LIMCH1Q9UPQ0 1083 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 ROBO3Q96MS0 1386 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 FSD2A1L4K1 749 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 IQCA1LA6NCM1 817 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 HTR3BO95264 441 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 EPB42P16452 691 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 PRDX5P30044 214 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 ZNF423Q2M1K9 1284 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 ZBTB46Q86UZ6 589 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 SPICE1Q8N0Z3 855 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 AGBL3Q8NEM8 1001 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 TMEM87BQ96K49 555 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 CDC6Q99741 560 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 UPF3BQ9BZI7 483 aaKnown RBP8.08□□□□□ -1.12
CLCN3-206ENST00000507875 CXorf56Q9H5V9 222 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 CRTAC1Q9NQ79 661 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 ZBTB21Q9ULJ3 1066 aa8.08□□□□□ -1.12
CLCN3-206ENST00000507875 TNPO3Q9Y5L0 923 aaKnown RBP8.08□□□□□ -1.12
CLCN3-206ENST00000507875 GOLGA6L3A6NEY3 463 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 CD53P19397 219 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 RPS12P25398 132 aaKnown RBP8.07□□□□□ -1.12
CLCN3-206ENST00000507875 MCM5P33992 734 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 INPP5AQ14642 412 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 TNIP1Q15025 636 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 ARMC3Q5W041 872 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 RALYLQ86SE5 291 aaKnown RBP8.07□□□□□ -1.12
CLCN3-206ENST00000507875 C19orf47Q8N9M1 422 aaKnown RBP8.07□□□□□ -1.12
CLCN3-206ENST00000507875 ZNF384Q8TF68 577 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 TEKT1Q969V4 418 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 ZDHHC15Q96MV8 337 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 DHRS4Q9BTZ2 278 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 SEZ6LQ9BYH1 1024 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 DDX20Q9UHI6 824 aaKnown RBP8.07□□□□□ -1.12
CLCN3-206ENST00000507875 HDAC9Q9UKV0 1011 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 BLACEA4D250 179 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 PIP5K1CO60331 668 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 ABLIM3O94929 683 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 RNF144AP50876 292 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-206ENST00000507875 PRELPP51888 382 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 RCAN1P53805 252 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 EVCP57679 992 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 GALEQ14376 348 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 AKNAD1Q5T1N1 836 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 MAP1SQ66K74 1059 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-206ENST00000507875 DGKHQ86XP1 1220 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 OBP2AQ9NY56 170 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 ZDHHC9Q9Y397 364 aa8.07□□□□□ -1.12
CLCN3-206ENST00000507875 DNAJC25-GNG10A0A024R161 153 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 DCDC2BA2VCK2 349 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ORC4O43929 436 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 RFPL3O75679 317 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ECEL1O95672 775 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 PPARAQ07869 468 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 AOC3Q16853 763 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 FAM83BQ5T0W9 1011 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 TDRD10Q5VZ19 366 aaKnown RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 MFSD6Q6ZSS7 791 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ADGRA1Q86SQ6 560 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 TMEM40Q8WWA1 233 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms