RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 CUL5Q93034 780 aa18.89■□□□□ 0.61
SNF8-205ENST00000507302 ZBTB10Q96DT7 871 aa18.89■□□□□ 0.61
SNF8-205ENST00000507302 CDCA3Q99618 268 aaPredicted RBP18.89■□□□□ 0.61
SNF8-205ENST00000507302 PCDHGC5Q9Y5F6 944 aa18.89■□□□□ 0.61
SNF8-205ENST00000507302 TAF6LQ9Y6J9 622 aa18.89■□□□□ 0.61
SNF8-205ENST00000507302 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
SNF8-205ENST00000507302 ERICH2A1L162 156 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 FSCN2O14926 492 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 IGHDP01880 384 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 SARSP49591 514 aaKnown RBP18.88■□□□□ 0.61
SNF8-205ENST00000507302 DUSP6Q16828 381 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 B4GALNT3Q6L9W6 998 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 NME8Q8N427 588 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 RASGRP4Q8TDF6 673 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 GLG1Q92896 1179 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 CELF4Q9BZC1 486 aaKnown RBP18.88■□□□□ 0.61
SNF8-205ENST00000507302 S1PR5Q9H228 398 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 RWDD1Q9H446 243 aaPredicted RBP18.88■□□□□ 0.61
SNF8-205ENST00000507302 JADE2Q9NQC1 790 aa18.88■□□□□ 0.61
SNF8-205ENST00000507302 SMIM35A0A1B0GVV1 85 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 PROB1E7EW31 1015 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 E7EWF7 191 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 CSPG5O95196 566 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 AVPR2P30518 371 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 GATMP50440 423 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 VCPP55072 806 aaKnown RBP18.87■□□□□ 0.61
SNF8-205ENST00000507302 MTMR1Q13613 665 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 PAN2Q504Q3 1202 aaKnown RBP18.87■□□□□ 0.61
SNF8-205ENST00000507302 PDE12Q6L8Q7 609 aaKnown RBP18.87■□□□□ 0.61
SNF8-205ENST00000507302 PLPPR4Q7Z2D5 763 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 CATIPQ7Z7H3 387 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 RBM23Q86U06 439 aaKnown RBP18.87■□□□□ 0.61
SNF8-205ENST00000507302 MB21D2Q8IYB1 491 aaPredicted RBP18.87■□□□□ 0.61
SNF8-205ENST00000507302 RRP36Q96EU6 259 aaKnown RBP18.87■□□□□ 0.61
SNF8-205ENST00000507302 MTA3Q9BTC8 594 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 IRF2BPLQ9H1B7 796 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 TLE6Q9H808 572 aa18.87■□□□□ 0.61
SNF8-205ENST00000507302 NFASCO94856 1347 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 DDAH1O94760 285 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 PTH1RQ03431 593 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 PAK2Q13177 524 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 SART3Q15020 963 aaKnown RBP18.86■□□□□ 0.61
SNF8-205ENST00000507302 PLCB4Q15147 1175 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 PTPN21Q16825 1174 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 NCOA7Q8NI08 942 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 LZTS2Q9BRK4 669 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 FAM49AQ9H0Q0 323 aaPredicted RBP18.86■□□□□ 0.61
SNF8-205ENST00000507302 ERVK-5Q9HDB9 667 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 TLR9Q9NR96 1032 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 LZTS1Q9Y250 596 aa18.86■□□□□ 0.61
SNF8-205ENST00000507302 MGEA5O60502 916 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 ATG7O95352 703 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 ERVFC1P60507 584 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 IGBP1P78318 339 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 RBM10P98175 930 aaKnown RBP18.85■□□□□ 0.61
SNF8-205ENST00000507302 PIBF1Q8WXW3 757 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
SNF8-205ENST00000507302 PSTPIP2Q9H939 334 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 LY9Q9HBG7 655 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 JPH1Q9HDC5 661 aaPredicted RBP18.85■□□□□ 0.61
SNF8-205ENST00000507302 RGS18Q9NS28 235 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 PCDHB12Q9Y5F1 795 aa18.85■□□□□ 0.61
SNF8-205ENST00000507302 IGKV6D-21A0A0A0MT36 114 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 C9IYK1 514 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 M0QZ92 97 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 PER2O15055 1255 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 GFRA3O60609 400 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 FGF18O76093 207 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 KIF5BP33176 963 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 FAM189BP81408 668 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 ZNF654Q8IZM8 581 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 SRBD1Q8N5C6 995 aaKnown RBP18.84■□□□□ 0.61
SNF8-205ENST00000507302 RPGRIP1Q96KN7 1286 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 NEK1Q96PY6 1258 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 KCNH7Q9NS40 1196 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 SLC9A2Q9UBY0 812 aa18.84■□□□□ 0.61
SNF8-205ENST00000507302 EVPLQ92817 2033 aa18.83■□□□□ 0.61
SNF8-205ENST00000507302 SLC26A2P50443 739 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 KRT76Q01546 638 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 PLCB3Q01970 1234 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 TMEM62Q0P6H9 643 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 SYCE2Q6PIF2 218 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 MTHFD1LQ6UB35 978 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 RALYLQ86SE5 291 aaKnown RBP18.83■□□□□ 0.6
SNF8-205ENST00000507302 TEX2Q8IWB9 1127 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 COLGALT1Q8NBJ5 622 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 CTCFLQ8NI51 663 aaPredicted RBP18.83■□□□□ 0.6
SNF8-205ENST00000507302 TRAPPC12Q8WVT3 735 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 CWH43Q9H720 699 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 AAASQ9NRG9 546 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 C1orf112Q9NSG2 853 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
SNF8-205ENST00000507302 SEC63Q9UGP8 760 aaKnown RBP18.83■□□□□ 0.6
SNF8-205ENST00000507302 VPS13AQ96RL7 3174 aa18.83■□□□□ 0.6
SNF8-205ENST00000507302 PLEKHA8P1O95397 391 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 GSPT1P15170 499 aaKnown RBP18.82■□□□□ 0.6
SNF8-205ENST00000507302 GNAQP50148 359 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 ACTR2P61160 394 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 ANKRD54Q6NXT1 300 aa18.82■□□□□ 0.6
SNF8-205ENST00000507302 SLC24A5Q71RS6 500 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms