RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 MDFIQ99750 246 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 RNF208Q9H0X6 261 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 JMJD4Q9H9V9 463 aa11□□□□□ -0.65
CLCN3-205ENST00000506924 PLEKHA8P1O95397 391 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 HMGCRP04035 888 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 XRCC5P13010 732 aaKnown RBP10.99□□□□□ -0.65
CLCN3-205ENST00000506924 RPS6KB1P23443 525 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 COPB2P35606 906 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 LIFRP42702 1097 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 CNTN2Q02246 1040 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
CLCN3-205ENST00000506924 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 QRICH1Q2TAL8 776 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 NSMFQ6X4W1 530 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 MICU3Q86XE3 530 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 HOMER1Q86YM7 354 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 TMTC2Q8N394 836 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 CHST13Q8NET6 341 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 CTCFLQ8NI51 663 aaPredicted RBP10.99□□□□□ -0.65
CLCN3-205ENST00000506924 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 ACDQ96AP0 544 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 UPF3BQ9BZI7 483 aaKnown RBP10.99□□□□□ -0.65
CLCN3-205ENST00000506924 ACAD9Q9H845 621 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 ZFATQ9P243 1243 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 KLF15Q9UIH9 416 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 SLC12A7Q9Y666 1083 aa10.99□□□□□ -0.65
CLCN3-205ENST00000506924 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
CLCN3-205ENST00000506924 KLF18A0A0U1RQI7 1052 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 NFIBO00712 420 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 CYTH3O43739 400 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 DDAH1O94760 285 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 HMGB1P09429 215 aaKnown RBP10.98□□□□□ -0.65
CLCN3-205ENST00000506924 EN2P19622 333 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-205ENST00000506924 PSMA5P28066 241 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 CCND3P30281 292 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-205ENST00000506924 NRLP54845 237 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 COL19A1Q14993 1142 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 ZNF792Q3KQV3 632 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 TTC39BQ5VTQ0 682 aaPredicted RBP10.98□□□□□ -0.65
CLCN3-205ENST00000506924 TMC7Q7Z402 723 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 ABRAQ8N0Z2 381 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 OR13H1Q8NG92 308 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 BRF1Q92994 677 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 MAML3Q96JK9 1138 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 PIGSQ96S52 555 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 A1CFQ9NQ94 594 aaKnown RBP10.98□□□□□ -0.65
CLCN3-205ENST00000506924 FBXO40Q9UH90 709 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 BAZ2BQ9UIF8 2168 aaKnown RBP10.98□□□□□ -0.65
CLCN3-205ENST00000506924 PLXNA1Q9UIW2 1896 aa10.98□□□□□ -0.65
CLCN3-205ENST00000506924 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 PPP1R11O60927 126 aaPredicted RBP10.97□□□□□ -0.65
CLCN3-205ENST00000506924 PSAPP07602 524 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 HOXC6P09630 235 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 CNGA1P29973 690 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 PCBP4P57723 403 aaKnown RBP10.97□□□□□ -0.65
CLCN3-205ENST00000506924 GPLD1P80108 840 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 PLAURQ03405 335 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 TKFCQ3LXA3 575 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 MFSD14CQ5VZR4 134 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 APOA5Q6Q788 366 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 SLC30A10Q6XR72 485 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 SYNE3Q6ZMZ3 975 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 RUFY3Q7L099 469 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 SRBD1Q8N5C6 995 aaKnown RBP10.97□□□□□ -0.65
CLCN3-205ENST00000506924 FANCBQ8NB91 859 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 TRPV1Q8NER1 839 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 CLEC4DQ8WXI8 215 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 DEFB118Q96PH6 123 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 SLC5A4Q9NY91 659 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 WDR19Q8NEZ3 1342 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 ZNF236Q9UL36 1845 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 MYH6P13533 1939 aa10.97□□□□□ -0.65
CLCN3-205ENST00000506924 DNAJC25-GNG10A0A024R161 153 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 ELOA3CA0A087WX78 387 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-205ENST00000506924 ELOA3DA6NLF2 546 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-205ENST00000506924 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 TREHO43280 583 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 ZBTB43O43298 467 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 OIP5O43482 229 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 EPB41L2O43491 1005 aaKnown RBP10.96□□□□□ -0.65
CLCN3-205ENST00000506924 MMP20O60882 483 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 TNFRSF21O75509 655 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 CALML3P27482 149 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 KIF5BP33176 963 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 BAATQ14032 418 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-205ENST00000506924 ELOA3BQ3SY89 546 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 ANO1Q5XXA6 986 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 KRT25Q7Z3Z0 450 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 RAB44Q7Z6P3 723 aaPredicted RBP10.96□□□□□ -0.65
CLCN3-205ENST00000506924 SGMS1Q86VZ5 419 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 FCHSD1Q86WN1 690 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 ELOA3Q8NG57 546 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 FGD4Q96M96 766 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLCN3-205ENST00000506924 DNAJC25Q9H1X3 360 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms