RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, human

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOPBP1-205	ENST00000506779	PFKP	Q01813	784 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	USP10	Q14694	798 aa	Known RBP	4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	GPR162	Q16538	588 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	AGBL4	Q5VU57	503 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CD276	Q5ZPR3	534 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779		Q6ZPA2	131 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ULK2	Q8IYT8	1036 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CELF2-AS1	Q8N7Q2	184 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	DCAF4	Q8WV16	495 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	AJUBA	Q96IF1	538 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	AARSD1	Q9BTE6	412 aa	Known RBP	4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ST7	Q9NRC1	585 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	KCND1	Q9NSA2	647 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779	DSE	Q9UL01	958 aa		4.12	□□□□□ -1.75
TOPBP1-205	ENST00000506779		A0A0A6YYK5	440 aa	Predicted RBP	4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	IQCA1L	A6NCM1	817 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ZNF839	A8K0R7	811 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	FOXN1	O15353	648 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	PRODH	O43272	600 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CDK4	P11802	303 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	SERINC3	Q13530	473 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	LBX2	Q6XYB7	198 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	TAX1BP1	Q86VP1	789 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	IL17D	Q8TAD2	202 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	NEIL1	Q96FI4	390 aa	Predicted RBP	4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ZFYVE21	Q9BQ24	234 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	TACO1	Q9BSH4	297 aa	Known RBP	4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ALG1	Q9BT22	464 aa		4.11	□□□□□ -1.75
TOPBP1-205	ENST00000506779	FAM47E-STBD1	D6RA91	191 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	NKRF	O15226	690 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	NUDT3	O95989	172 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ZNF37A	P17032	561 aa	Predicted RBP	4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ATP2B1	P20020	1258 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	COMT	P21964	271 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	RANGAP1	P46060	587 aa	Predicted RBP	4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	RRAD	P55042	308 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	RAC3	P60763	192 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	GPR85	P60893	370 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	IFRD2	Q12894	506 aa	Predicted RBP	4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	DDR2	Q16832	855 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	KCNT2	Q6UVM3	1135 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	KCTD1	Q719H9	257 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	IFNL3	Q8IZI9	196 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CARD11	Q9BXL7	1154 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	SLC2A4RG	Q9NR83	387 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	PTPN22	Q9Y2R2	807 aa		4.1	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CUTA	O60888	179 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	STK10	O94804	968 aa	Known RBP	4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	SOD2	P04179	222 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CAPNS1	P04632	268 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ZNF888	P0CJ79	500 aa	Predicted RBP	4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	POLD1	P28340	1107 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	RBL2	Q08999	1139 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	RAB33A	Q14088	237 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	DPP8	Q6V1X1	898 aa	Predicted RBP	4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	NSMF	Q6X4W1	530 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	MICALCL	Q6ZW33	695 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ANKS3	Q6ZW76	656 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	DPH6	Q7L8W6	267 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CLIP3	Q96DZ5	547 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	SGSM3	Q96HU1	749 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	CD244	Q9BZW8	370 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	KATNBL1	Q9H079	304 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	SLC39A2	Q9NP94	309 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	ARHGAP28	Q9P2N2	729 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	MSRB2	Q9Y3D2	182 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	TELO2	Q9Y4R8	837 aa		4.09	□□□□□ -1.75
TOPBP1-205	ENST00000506779	TRAV20	A0A0B4J274	112 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	ESYT3	A0FGR9	886 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	BLACE	A4D250	179 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	CDC14B	O60729	498 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	FGFR1	P11362	822 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	PABPC1	P11940	636 aa	Known RBP	4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	POU3F3	P20264	500 aa	Predicted RBP	4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	NTRK3	Q16288	839 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	WDR72	Q3MJ13	1102 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	ZMAT1	Q5H9K5	638 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	NBPF6	Q5VWK0	638 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	STYK1	Q6J9G0	422 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	SYCE2	Q6PIF2	218 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	EP400NL	Q6ZTU2	488 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	PRIMA1	Q86XR5	153 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	FUK	Q8N0W3	1084 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	LRRC47	Q8N1G4	583 aa	Known RBP	4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	UBXN4	Q92575	508 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	NBPF4	Q96M43	638 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	OR14A2	Q96R54	314 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	C12orf65	Q9H3J6	166 aa	Known RBP	4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	IPPK	Q9H8X2	491 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	ARHGEF4	Q9NR80	690 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	RIC8B	Q9NVN3	520 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	OAZ3	Q9UMX2	235 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	NR2E1	Q9Y466	385 aa		4.08	□□□□□ -1.76
TOPBP1-205	ENST00000506779	RAD17	O75943	681 aa		4.07	□□□□□ -1.76
TOPBP1-205	ENST00000506779	IL18BP	O95998	194 aa		4.07	□□□□□ -1.76
TOPBP1-205	ENST00000506779	HMGCR	P04035	888 aa		4.07	□□□□□ -1.76

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