RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ZNF286BP0CG31 522 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 GCFC2P16383 781 aaKnown RBP8.22□□□□□ -1.09
GYPB-206ENST00000506516 ACTR2P61160 394 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 KRT76Q01546 638 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 GUCY1B3Q02153 619 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 NR5A1Q13285 461 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 ITGB3BPQ13352 177 aaPredicted RBP8.22□□□□□ -1.09
GYPB-206ENST00000506516 PPP4R3AQ6IN85 833 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
GYPB-206ENST00000506516 SH3RF1Q7Z6J0 888 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 NEK8Q86SG6 692 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 C16orf70Q9BSU1 422 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 TRPV6Q9H1D0 765 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 FOXP1Q9H334 677 aaPredicted RBP8.22□□□□□ -1.09
GYPB-206ENST00000506516 PDLIM7Q9NR12 457 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 ERAP1Q9NZ08 941 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 HDAC6Q9UBN7 1215 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 DDX25Q9UHL0 483 aaKnown RBP8.22□□□□□ -1.09
GYPB-206ENST00000506516 GTF2IRD1Q9UHL9 959 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 LRRC37A2A6NM11 1700 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 FRMPD3Q5JV73 1810 aa8.22□□□□□ -1.09
GYPB-206ENST00000506516 TRIM43BA6NCK2 446 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 H3BQV1 296 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 DDX39AO00148 427 aaKnown RBP8.21□□□□□ -1.1
GYPB-206ENST00000506516 MSH4O15457 936 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 DHX15O43143 795 aaKnown RBP8.21□□□□□ -1.1
GYPB-206ENST00000506516 GAS7O60861 476 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 ATG7O95352 703 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 CD2BP2O95400 341 aaKnown RBP8.21□□□□□ -1.1
GYPB-206ENST00000506516 GJB2P29033 226 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 BMP8BP34820 402 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 MAGEA10P43363 369 aaPredicted RBP8.21□□□□□ -1.1
GYPB-206ENST00000506516 GCGRP47871 477 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 SLC26A2P50443 739 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 STAT5BP51692 787 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 BFSP2Q13515 415 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 PTGISQ16647 500 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 LRCH2Q5VUJ6 765 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 FAM160B1Q5W0V3 765 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 MIS18BP1Q6P0N0 1132 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 PLPPR4Q7Z2D5 763 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 SMAP1Q8IYB5 467 aaPredicted RBP8.21□□□□□ -1.1
GYPB-206ENST00000506516 TMEM199Q8N511 208 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 CCDC155Q8N6L0 562 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 RETREG2Q8NC44 543 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 BADQ92934 168 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 TRIM43Q96BQ3 446 aaPredicted RBP8.21□□□□□ -1.1
GYPB-206ENST00000506516 FAM20AQ96MK3 541 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 MBOAT7Q96N66 472 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 RIT2Q99578 217 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 TEKT3Q9BXF9 490 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 HIPK3Q9H422 1215 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 TRMT13Q9NUP7 481 aaKnown RBP8.21□□□□□ -1.1
GYPB-206ENST00000506516 TBX21Q9UL17 535 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 SAMM50Q9Y512 469 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 PCDHA10Q9Y5I2 948 aa8.21□□□□□ -1.1
GYPB-206ENST00000506516 C17orf102A2RUQ5 167 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 GOLGA8CPA6NN73 597 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 WDR64B1ANS9 1081 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 BACH1O14867 736 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 TBX3O15119 743 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 EDIL3O43854 480 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 LGR5O75473 907 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 TDP2O95551 362 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 PSAPP07602 524 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 SMIM10L2AP0DMW4 78 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 SMIM10L2BP0DMW5 78 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 SFNP31947 248 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 CUL4AQ13619 759 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 GDF6Q6KF10 455 aaPredicted RBP8.2□□□□□ -1.1
GYPB-206ENST00000506516 MFSD5Q6N075 450 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 SWSAP1Q6NVH7 229 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 ABHD15Q6UXT9 468 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 SLFN12Q8IYM2 578 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 RDM1Q8NG50 284 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 PPP1R13LQ8WUF5 828 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 ATP6V0A1Q93050 837 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 LENG9Q96B70 501 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 LRCH3Q96II8 777 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 UIMC1Q96RL1 719 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 GDF15Q99988 308 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 UBE2OQ9C0C9 1292 aaKnown RBP8.2□□□□□ -1.1
GYPB-206ENST00000506516 RNPEPQ9H4A4 650 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 ZNF302Q9NR11 478 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 NOL7Q9UMY1 257 aaKnown RBP8.2□□□□□ -1.1
GYPB-206ENST00000506516 TELO2Q9Y4R8 837 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 KIAA1217Q5T5P2 1943 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 EMSYQ7Z589 1322 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 NRCAMQ92823 1304 aa8.2□□□□□ -1.1
GYPB-206ENST00000506516 IGKV6D-21A0A0A0MT36 114 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 A0A1W2PPC1 479 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 RRN3P2A6NIE6 340 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 K7ELQ4 463 aaPredicted RBP8.19□□□□□ -1.1
GYPB-206ENST00000506516 PSMD10O75832 226 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 PARNO95453 639 aaKnown RBP8.19□□□□□ -1.1
GYPB-206ENST00000506516 CCNE2O96020 404 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 CYP2C9P11712 490 aa8.19□□□□□ -1.1
GYPB-206ENST00000506516 PDCP20941 246 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms