RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 BICD2Q8TD16 824 aa13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 TRAPPC12Q8WVT3 735 aa13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 CRYGNQ8WXF5 182 aa13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 ZBTB10Q96DT7 871 aa13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 CELF4Q9BZC1 486 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 AGO3Q9H9G7 860 aaKnown RBP13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 TCEAL9Q9UHQ7 104 aa13.71□□□□□ -0.21
PDLIM7-214ENST00000505746 NID2Q14112 1375 aa13.71□□□□□ -0.22
PDLIM7-214ENST00000505746 ADGRA3Q8IWK6 1321 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 IGLV3-22A0A075B6J6 115 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 DHX15O43143 795 aaKnown RBP13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 CCNE2O96020 404 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 KLRC1P26715 233 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 CD52P31358 61 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 KRT76Q01546 638 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 TMEM62Q0P6H9 643 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 PAK2Q13177 524 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 BTG3Q14201 252 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 PKN1Q16512 942 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 ZNF484Q5JVG2 852 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 PDXDC2PQ6P474 469 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 ATP8B4Q8TF62 1192 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 ZNF577Q9BSK1 485 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 C11orf84Q9BUA3 381 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 AGXT2Q9BYV1 514 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 ZNF302Q9NR11 478 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 PTPRSQ13332 1948 aa13.7□□□□□ -0.22
PDLIM7-214ENST00000505746 COL4A6Q14031 1691 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 C5orf67F2Z3F1 127 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 EPB41L2O43491 1005 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 DGKIO75912 1065 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 STAG3L1P0CL83 205 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 CTNNB1P35222 781 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 BMPR1AP36894 532 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 PUS10Q3MIT2 529 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 LEXMQ3ZCV2 418 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 ODR4Q5SWX8 454 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 ZNF746Q6NUN9 644 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 SWSAP1Q6NVH7 229 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 CKAP2LQ8IYA6 745 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 SMAP1Q8IYB5 467 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 CLP1Q92989 425 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 PHKBQ93100 1093 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 ZNF689Q96CS4 500 aaPredicted RBP13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 C1QTNF1Q9BXJ1 281 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 LMAN2LQ9H0V9 348 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 NSUN3Q9H649 340 aaKnown RBP13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 PADI3Q9ULW8 664 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 TRANK1O15050 2925 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 COL1A2P08123 1366 aa13.69□□□□□ -0.22
PDLIM7-214ENST00000505746 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 NCK2O43639 380 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 PSAPP07602 524 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 IFNAR1P17181 557 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 KCNA5P22460 613 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 PDIA3P30101 505 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 EVCP57679 992 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 NTRK3Q16288 839 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 PRR16Q569H4 304 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 RTN4RL1Q86UN2 441 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 NPAS4Q8IUM7 802 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 PLVAPQ9BX97 442 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 RC3H2Q9HBD1 1191 aaKnown RBP13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 PCDHA10Q9Y5I2 948 aa13.68□□□□□ -0.22
PDLIM7-214ENST00000505746 COL9A1P20849 921 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 CIITAP33076 1130 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 TCEAL5Q5H9L2 206 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 RUFY3Q7L099 469 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 TRIM22Q8IYM9 498 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 CMTR2Q8IYT2 770 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 KIAA0319LQ8IZA0 1049 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 LINC01599Q8WXQ3 324 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 UIMC1Q96RL1 719 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 SH3GLB2Q9NR46 395 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 LRFN2Q9ULH4 789 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 CEP131Q9UPN4 1083 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 SAMM50Q9Y512 469 aa13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 MAFBQ9Y5Q3 323 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-214ENST00000505746 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-214ENST00000505746 TTC28Q96AY4 2481 aa13.66□□□□□ -0.22
PDLIM7-214ENST00000505746 DOCK5Q9H7D0 1870 aa13.66□□□□□ -0.22
PDLIM7-214ENST00000505746 ADAMTS3O15072 1205 aa13.66□□□□□ -0.22
PDLIM7-214ENST00000505746 GPR182O15218 404 aa13.66□□□□□ -0.22
PDLIM7-214ENST00000505746 RPS6KA5O75582 802 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms