RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 RUSC1Q9BVN2 902 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 ZC3H12CQ9C0D7 883 aaKnown RBP17.54■□□□□ 0.4
DDX41-205ENST00000505081 BHMT2Q9H2M3 363 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 NAGPAQ9UK23 515 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
DDX41-205ENST00000505081 KIF4AO95239 1232 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 ALKBH5Q6P6C2 394 aaKnown RBP17.54■□□□□ 0.4
DDX41-205ENST00000505081 LENG9Q96B70 501 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 RGL1Q9NZL6 768 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 DNM3Q9UQ16 869 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 FAM169AQ9Y6X4 670 aa17.54■□□□□ 0.4
DDX41-205ENST00000505081 HOXA10P31260 410 aaPredicted RBP17.53■□□□□ 0.4
DDX41-205ENST00000505081 LIG3P49916 1009 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 HLTFQ14527 1009 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX41-205ENST00000505081 SIAH1Q8IUQ4 282 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 KSR1Q8IVT5 923 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 OR2W6PQ8NHA6 318 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 PCDHB13Q9Y5F0 798 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 CYP3A7-CYP3A51PA0A087WV96 503 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 EBAG9O00559 213 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 GDF11O95390 407 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
DDX41-205ENST00000505081 CYP3A7P24462 503 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 GBP6Q6ZN66 633 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 SIX2Q9NPC8 291 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 TRAF3IP3Q9Y228 551 aa17.53■□□□□ 0.4
DDX41-205ENST00000505081 ASTN1O14525 1302 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 PITPNM2Q9BZ72 1349 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 TMCO5BA8MYB1 307 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.4
DDX41-205ENST00000505081 SKOR1P84550 965 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 IKQ13123 557 aaPredicted RBP17.52■□□□□ 0.4
DDX41-205ENST00000505081 EPHA7Q15375 998 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 EPM2AIP1Q7L775 607 aaPredicted RBP17.52■□□□□ 0.4
DDX41-205ENST00000505081 SYT2Q8N9I0 419 aaPredicted RBP17.52■□□□□ 0.4
DDX41-205ENST00000505081 LRRC57Q8N9N7 239 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 CRYGNQ8WXF5 182 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 MBOAT7Q96N66 472 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 DDX47Q9H0S4 455 aaKnown RBP17.52■□□□□ 0.4
DDX41-205ENST00000505081 NEUROG2Q9H2A3 272 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 CENPHQ9H3R5 247 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 LY75O60449 1722 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 EML1O00423 815 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 ZBTB39O15060 712 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 GCNT3O95395 438 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 NR3C1P04150 777 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 ITGA4P13612 1032 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 TTC31Q49AM3 519 aaPredicted RBP17.52■□□□□ 0.4
DDX41-205ENST00000505081 MAATS1Q7Z4T9 603 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 FRMD5Q7Z6J6 570 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 SLFN12Q8IYM2 578 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 MICALL1Q8N3F8 863 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 PIGOQ8TEQ8 1089 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 TMEM59LQ9UK28 342 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 PLAAQ9Y263 795 aa17.52■□□□□ 0.4
DDX41-205ENST00000505081 POLRMTO00411 1230 aaKnown RBP17.51■□□□□ 0.39
DDX41-205ENST00000505081 ECHS1P30084 290 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 KIAA0825Q8IV33 1275 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 METTL13Q8N6R0 699 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 SMCHD1A6NHR9 2005 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 MSH4O15457 936 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 RPA1P27694 616 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 TNNC1P63316 161 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 CERKLQ49MI3 558 aaPredicted RBP17.51■□□□□ 0.39
DDX41-205ENST00000505081 SP8Q8IXZ3 490 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 TEKT1Q969V4 418 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 SLC35C1Q96A29 364 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 DBNDD1Q9H9R9 158 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 GCNT4Q9P109 453 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 GFPT2O94808 682 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 CEP85LQ5SZL2 805 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 TPCN2Q8NHX9 752 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 U2AF1L4Q8WU68 220 aaKnown RBP17.51■□□□□ 0.39
DDX41-205ENST00000505081 NAP1L4Q99733 375 aaKnown RBP17.51■□□□□ 0.39
DDX41-205ENST00000505081 PLCB1Q9NQ66 1216 aa17.51■□□□□ 0.39
DDX41-205ENST00000505081 ATAD5Q96QE3 1844 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 DDX3XO00571 662 aaKnown RBP eCLIP17.5■□□□□ 0.39
DDX41-205ENST00000505081 NDUFAB1O14561 156 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 FLT3P36888 993 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 CRKP46108 304 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
DDX41-205ENST00000505081 ZC2HC1CQ53FD0 456 aaPredicted RBP17.5■□□□□ 0.39
DDX41-205ENST00000505081 SH3BP5LQ7L8J4 393 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 PPM1EQ8WY54 764 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 ZBTB48P10074 688 aaPredicted RBP17.5■□□□□ 0.39
DDX41-205ENST00000505081 NMT1P30419 496 aaKnown RBP17.5■□□□□ 0.39
DDX41-205ENST00000505081 SEC24CP53992 1094 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 JAG1P78504 1218 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 COG2Q14746 738 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 TADA2BQ86TJ2 420 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 EFCAB13Q8IY85 973 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 SCFD2Q8WU76 684 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 TAF1DQ9H5J8 278 aaPredicted RBP17.5■□□□□ 0.39
DDX41-205ENST00000505081 NOC2LQ9Y3T9 749 aaKnown RBP17.5■□□□□ 0.39
DDX41-205ENST00000505081 MYO3BQ8WXR4 1341 aa17.5■□□□□ 0.39
DDX41-205ENST00000505081 F5H6K3 240 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms