RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
PDLIM7-213ENST00000505074 PRR23AA6NEV1 266 aa18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 LPIN1Q14693 890 aa18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 UTP14CQ5TAP6 766 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 RSPH3Q86UC2 560 aa18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 SRBD1Q8N5C6 995 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 INPP4AQ96PE3 977 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 BCAS3Q9H6U6 928 aa18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 TLE6Q9H808 572 aa18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 FRMPD4Q14CM0 1322 aa18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 NRCAMQ92823 1304 aa18.37■□□□□ 0.53
PDLIM7-213ENST00000505074 hCG_1642624A0A1W2PR95 340 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 FSD2A1L4K1 749 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 TAF2Q6P1X5 1199 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 METTL7BQ6UX53 244 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 NLRX1Q86UT6 975 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 MICU3Q86XE3 530 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 GPR20Q99678 358 aa18.36■□□□□ 0.53
PDLIM7-213ENST00000505074 LOXHD1Q8IVV2 1947 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 SPATA31C2B4DYI2 1134 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 SMARCA1P28370 1054 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 NBL1P41271 181 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 LIFRP42702 1097 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 ID4P47928 161 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 MGAT3Q09327 533 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 TRIM50Q86XT4 487 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 MICAL1Q8TDZ2 1067 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 SUSD6Q92537 303 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 NEK1Q96PY6 1258 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 PSTPIP2Q9H939 334 aa18.35■□□□□ 0.53
PDLIM7-213ENST00000505074 SPDYE3A6NKU9 549 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 PIK3CDO00329 1044 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 MEIS2O14770 477 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 PDGFBP01127 241 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 STAG3L1P0CL83 205 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 SEMA3FQ13275 785 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 COL9A3Q14050 684 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 UBE2SQ16763 222 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 PAN2Q504Q3 1202 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 FBXO47Q5MNV8 452 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 XRRA1Q6P2D8 792 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 TSHZ1Q6ZSZ6 1077 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 NPAS4Q8IUM7 802 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 PKD2L1Q9P0L9 805 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 FAM186AA6NE01 2351 aa18.34■□□□□ 0.53
PDLIM7-213ENST00000505074 PER2O15055 1255 aa18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 NECTIN1Q15223 517 aa18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 RUFY4Q6ZNE9 571 aa18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 ATP8B4Q8TF62 1192 aa18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 FTHL17Q9BXU8 183 aa18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
PDLIM7-213ENST00000505074 MYO10Q9HD67 2058 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 PPFIA3O75145 1194 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 UBE3AQ05086 875 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 BMP2KLQ5H9B9 411 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 TMTC3Q6ZXV5 915 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 FANCBQ8NB91 859 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 GIMAP8Q8ND71 665 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 NKD2Q969F2 451 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 CDHR1Q96JP9 859 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 NAP1L2Q9ULW6 460 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 CDY2AQ9Y6F7 541 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
PDLIM7-213ENST00000505074 RIF1Q5UIP0 2472 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 CD52P31358 61 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 DUSP6Q16828 381 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 UBALD2Q8IYN6 164 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 CRIPAKQ8N1N5 446 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 DNAJB3Q8WWF6 145 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 LINC01599Q8WXQ3 324 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 GPRASP2Q96D09 838 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 TCEANC2Q96MN5 208 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 SENP7Q9BQF6 1050 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 TELO2Q9Y4R8 837 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 PCDHB12Q9Y5F1 795 aa18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 FNDC1Q4ZHG4 1894 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-213ENST00000505074 MARK3P27448 753 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 TCF7P36402 384 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 NAPAP54920 295 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 MTMR1Q13613 665 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 MTMR3Q13615 1198 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 SPOUT1Q5T280 376 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 MCTP2Q6DN12 878 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 RTN4RL1Q86UN2 441 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 AGO3Q9H9G7 860 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 AAASQ9NRG9 546 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 RBM28Q9NW13 759 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 TUBE1Q9UJT0 475 aa18.3■□□□□ 0.52
PDLIM7-213ENST00000505074 LRFN2Q9ULH4 789 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms