RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 MARCH8Q5T0T0 291 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 RSPH3Q86UC2 560 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 VAV3Q9UKW4 847 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 PCDHA12Q9UN75 941 aa23.28■■□□□ 1.32
DDR1-255ENST00000504927 COL1A2P08123 1366 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 ACRP10323 421 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 ATP2B1P20020 1258 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 PDCP20941 246 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 IGBP1P78318 339 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 ZNF618Q5T7W0 954 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 MCTP1Q6DN14 999 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 ZNF365Q70YC5 407 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 LRCH3Q96II8 777 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 MTMR9Q96QG7 549 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.27■■□□□ 1.323e-6■■□□□ 11.5
DDR1-255ENST00000504927 MTIF3Q9H2K0 278 aaKnown RBP23.27■■□□□ 1.32
DDR1-255ENST00000504927 CEP131Q9UPN4 1083 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 PCDHA2Q9Y5H9 948 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 IGSF9BQ9UPX0 1349 aa23.27■■□□□ 1.32
DDR1-255ENST00000504927 RSPH10B2B2RC85 870 aa23.26■■□□□ 1.31
DDR1-255ENST00000504927 KIF28PB7ZC32 967 aa23.26■■□□□ 1.31
DDR1-255ENST00000504927 DKC1O60832 514 aaKnown RBP eCLIP23.26■■□□□ 1.31
DDR1-255ENST00000504927 SLC34A2O95436 690 aa23.26■■□□□ 1.31
DDR1-255ENST00000504927 RSPH10BP0C881 870 aa23.26■■□□□ 1.31
DDR1-255ENST00000504927 MCM7P33993 719 aa23.26■■□□□ 1.31
DDR1-255ENST00000504927 WNT8BQ93098 351 aa23.26■■□□□ 1.31
DDR1-255ENST00000504927 RNPC3Q96LT9 517 aaKnown RBP23.26■■□□□ 1.31
DDR1-255ENST00000504927 EPHA7Q15375 998 aa23.25■■□□□ 1.31
DDR1-255ENST00000504927 TTC38Q5R3I4 469 aa23.25■■□□□ 1.31
DDR1-255ENST00000504927 DEFB128Q7Z7B8 93 aa23.25■■□□□ 1.31
DDR1-255ENST00000504927 NME8Q8N427 588 aa23.25■■□□□ 1.31
DDR1-255ENST00000504927 HERVK_113Q902F9 699 aa23.25■■□□□ 1.31
DDR1-255ENST00000504927 EML1O00423 815 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 WNT7AO00755 349 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 P4HBP07237 508 aaKnown RBP23.24■■□□□ 1.31
DDR1-255ENST00000504927 ACTN1P12814 892 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 KLRC1P26715 233 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 PSMC5P62195 406 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 ZNF174Q15697 407 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 FAM26DQ5JW98 314 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 TRAF7Q6Q0C0 670 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 MTHFD1LQ6UB35 978 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 HSCBQ8IWL3 235 aa23.24■■□□□ 1.31
DDR1-255ENST00000504927 FTOQ9C0B1 505 aaKnown RBP eCLIP23.24■■□□□ 1.31
DDR1-255ENST00000504927 TTC12Q9H892 705 aaPredicted RBP23.24■■□□□ 1.31
DDR1-255ENST00000504927 SMIM35A0A1B0GVV1 85 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 MAGEB2O15479 319 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 ZNF862O60290 1169 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 CXCL10P02778 98 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 OATP04181 439 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 TXKP42681 527 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 QARSP47897 775 aaKnown RBP23.23■■□□□ 1.31
DDR1-255ENST00000504927 RILPL1Q5EBL4 403 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 XKR3Q5GH77 459 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 RASIP1Q5U651 963 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 RUFY4Q6ZNE9 571 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 VWCEQ96DN2 955 aa23.23■■□□□ 1.31
DDR1-255ENST00000504927 ZBTB42B2RXF5 422 aa23.22■■□□□ 1.31
DDR1-255ENST00000504927 PRKCEQ02156 737 aa23.22■■□□□ 1.31
DDR1-255ENST00000504927 SPIRE1Q08AE8 756 aa23.22■■□□□ 1.31
DDR1-255ENST00000504927 UGCGQ16739 394 aa23.22■■□□□ 1.31
DDR1-255ENST00000504927 IER5Q5VY09 327 aa23.22■■□□□ 1.31
DDR1-255ENST00000504927 TRMT1LQ7Z2T5 733 aaKnown RBP23.22■■□□□ 1.31
DDR1-255ENST00000504927 TRAPPC12Q8WVT3 735 aa23.22■■□□□ 1.31
DDR1-255ENST00000504927 DNAJB3Q8WWF6 145 aa23.22■■□□□ 1.31
DDR1-255ENST00000504927 NIFKQ9BYG3 293 aaKnown RBP23.22■■□□□ 1.31
DDR1-255ENST00000504927 KAT6AQ92794 2004 aa23.21■■□□□ 1.31
DDR1-255ENST00000504927 RBAK-RBAKDNI3L0D1 243 aa23.21■■□□□ 1.31
DDR1-255ENST00000504927 NBNO60934 754 aa23.21■■□□□ 1.31
DDR1-255ENST00000504927 TOB1P50616 345 aaPredicted RBP23.21■■□□□ 1.31
DDR1-255ENST00000504927 GPNMBQ14956 572 aa23.21■■□□□ 1.31
DDR1-255ENST00000504927 NCAPH2Q6IBW4 605 aa23.21■■□□□ 1.31
DDR1-255ENST00000504927 OTOP2Q7RTS6 562 aa23.21■■□□□ 1.31
DDR1-255ENST00000504927 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
DDR1-255ENST00000504927 TRIP12Q14669 1992 aaPredicted RBP23.2■■□□□ 1.3
DDR1-255ENST00000504927 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.2■■□□□ 1.3
DDR1-255ENST00000504927 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.2■■□□□ 1.3
DDR1-255ENST00000504927 LAD1O00515 517 aa23.2■■□□□ 1.3
DDR1-255ENST00000504927 OR52Z1P0C646 297 aa23.2■■□□□ 1.3
DDR1-255ENST00000504927 BANK1Q8NDB2 785 aa23.2■■□□□ 1.3
DDR1-255ENST00000504927 DDX11L8A8MPP1 907 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 M0QZ92 97 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 BAIAP3O94812 1187 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 TMOD1P28289 359 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 MBTPS1Q14703 1052 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 GPR153Q6NV75 609 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 CNKSR3Q6P9H4 555 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 BRAPQ7Z569 592 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 C4orf19Q8IY42 314 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 ZNF710Q8N1W2 664 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 NEK9Q8TD19 979 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 HSD17B14Q9BPX1 270 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 FAM49AQ9H0Q0 323 aaPredicted RBP23.19■■□□□ 1.3
DDR1-255ENST00000504927 ZSWIM4Q9H7M6 989 aa23.19■■□□□ 1.3
DDR1-255ENST00000504927 TANC1Q9C0D5 1861 aa23.18■■□□□ 1.3
DDR1-255ENST00000504927 EFCAB14O75071 495 aa23.18■■□□□ 1.3
DDR1-255ENST00000504927 STBD1O95210 358 aa23.18■■□□□ 1.3
DDR1-255ENST00000504927 C22orf31O95567 290 aa23.18■■□□□ 1.3
DDR1-255ENST00000504927 CHRNA1P02708 482 aa23.18■■□□□ 1.3
DDR1-255ENST00000504927 CTSHP09668 335 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms