RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 H3BRB1 525 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 BMP15O95972 392 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 MYCP01106 439 aaPredicted RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 CNGA1P29973 690 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 SFNP31947 248 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 CPT1AP50416 773 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 SNW1Q13573 536 aaKnown RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 GNL2Q13823 731 aaKnown RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 PLCB4Q15147 1175 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 TMEM119Q4V9L6 283 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 GNASQ5JWF2 1037 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 SPECC1Q5M775 1068 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 ADALQ6DHV7 355 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 C4orf19Q8IY42 314 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 ENGASEQ8NFI3 743 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 PPP1R13LQ8WUF5 828 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 WNT8BQ93098 351 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 FERMT2Q96AC1 680 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 AK8Q96MA6 479 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 EIF2AK1Q9BQI3 630 aaKnown RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 SDF4Q9BRK5 362 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 POLR3CQ9BUI4 534 aaPredicted RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 TUT1Q9H6E5 874 aaKnown RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 MLXIPQ9HAP2 919 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.56□□□□□ -1.52
LMNB1-208ENST00000504788 MYH11P35749 1972 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 SCN5AQ14524 2016 aa5.56□□□□□ -1.52
LMNB1-208ENST00000504788 A0A087WWV3 80 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 POTEB3A0JP26 581 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 CHMP2AO43633 222 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 GADD45BO75293 160 aaPredicted RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 CD4P01730 458 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 P4HBP07237 508 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 CAPN2P17655 700 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 MUTP22033 750 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 LONP1P36776 959 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 JAK3P52333 1124 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 KRT85P78386 507 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 DGKDQ16760 1214 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 RESP18Q5W5W9 173 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 SWSAP1Q6NVH7 229 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 TRAF7Q6Q0C0 670 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 POTEBQ6S5H4 581 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 DTHD1Q6ZMT9 781 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 BANK1Q8NDB2 785 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 KCNG4Q8TDN1 519 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 SYMPKQ92797 1274 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 DYDC2Q96IM9 177 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 ZNF396Q96N95 335 aaPredicted RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 LXNQ9BS40 222 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 NIFKQ9BYG3 293 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 SCAND2PQ9GZW5 306 aaPredicted RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 GOLPH3LQ9H4A5 285 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 GABBR1Q9UBS5 961 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 CFAP45Q9UL16 551 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 PTPRSQ13332 1948 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 SZT2Q5T011 3432 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 A0A1W2PQ27 194 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 A0A1W2PQ64 194 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 A0A1W2PQD8 194 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 QARSP47897 775 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 SLC26A2P50443 739 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 STAT5BP51692 787 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 PSMC5P62195 406 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 SP4Q02446 784 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 CYP4A11Q02928 519 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 CTTNQ14247 550 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 GPNMBQ14956 572 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 KIAA0753Q2KHM9 967 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 TRIM71Q2Q1W2 868 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 ANKRD33Q7Z3H0 272 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 MIER3Q7Z3K6 550 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 RNF180Q86T96 592 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 IFNLR1Q8IU57 520 aaPredicted RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 FAM126BQ8IXS8 530 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 DAW1Q8N136 415 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 KRI1Q8N9T8 703 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 PCSK9Q8NBP7 692 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 ATP8B4Q8TF62 1192 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 LMBR1Q8WVP7 490 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 DHX38Q92620 1227 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 MARVELD3Q96A59 401 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 ZBTB10Q96DT7 871 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 PAWRQ96IZ0 340 aaKnown RBP5.55□□□□□ -1.52
LMNB1-208ENST00000504788 SMARCAD1Q9H4L7 1026 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 TUFT1Q9NNX1 390 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 XPNPEP1Q9NQW7 623 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 ZNF302Q9NR11 478 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 LMBRD1Q9NUN5 540 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 ERAP1Q9NZ08 941 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 LRWD1Q9UFC0 647 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 GTF2IRD1Q9UHL9 959 aa5.55□□□□□ -1.52
LMNB1-208ENST00000504788 E9PMD0 336 aa5.54□□□□□ -1.52
LMNB1-208ENST00000504788 ACTN4O43707 911 aaKnown RBP5.54□□□□□ -1.52
LMNB1-208ENST00000504788 KPNA6O60684 536 aa5.54□□□□□ -1.52
LMNB1-208ENST00000504788 CUTAO60888 179 aa5.54□□□□□ -1.52
LMNB1-208ENST00000504788 C22orf31O95567 290 aa5.54□□□□□ -1.52
LMNB1-208ENST00000504788 OATP04181 439 aa5.54□□□□□ -1.52
LMNB1-208ENST00000504788 PSAPP07602 524 aa5.54□□□□□ -1.52
LMNB1-208ENST00000504788 XRCC6P12956 609 aaKnown RBP eCLIP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms