RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 PPIGQ13427 754 aaKnown RBP eCLIP9.14□□□□□ -0.95
RFC1-207ENST00000504554 MTMR1Q13613 665 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 ME3Q16798 604 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 UTP14CQ5TAP6 766 aaKnown RBP9.14□□□□□ -0.95
RFC1-207ENST00000504554 TMEM199Q8N511 208 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 NECAB1Q8N987 351 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 RNPC3Q96LT9 517 aaKnown RBP9.14□□□□□ -0.95
RFC1-207ENST00000504554 KIF2CQ99661 725 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 OSBPL7Q9BZF2 842 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 AGO4Q9HCK5 861 aaKnown RBP9.14□□□□□ -0.95
RFC1-207ENST00000504554 IL23AQ9NPF7 189 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 KCNH7Q9NS40 1196 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 GJB4Q9NTQ9 266 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
RFC1-207ENST00000504554 H3BRB1 525 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 M0R2N6 131 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 ADH1BP00325 375 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 FOSP01100 380 aaPredicted RBP9.13□□□□□ -0.95
RFC1-207ENST00000504554 IQCF3P0C7M6 154 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 SUPT20HL2P0C7V6 817 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 SMIM10L2AP0DMW4 78 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 SMIM10L2BP0DMW5 78 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 FDPSP14324 419 aaKnown RBP9.13□□□□□ -0.95
RFC1-207ENST00000504554 SSRP1Q08945 709 aaKnown RBP9.13□□□□□ -0.95
RFC1-207ENST00000504554 AP3B2Q13367 1082 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 MBTPS1Q14703 1052 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 CEP55Q53EZ4 464 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 OTOP2Q7RTS6 562 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 DEFB128Q7Z7B8 93 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 C7orf31Q8N865 590 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 HERVK_113Q902F9 699 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 LENG9Q96B70 501 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 ZBTB10Q96DT7 871 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 FAM161BQ96MY7 647 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 KATNAL1Q9BW62 490 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 TTYH1Q9H313 450 aaPredicted RBP9.13□□□□□ -0.95
RFC1-207ENST00000504554 RNPEPQ9H4A4 650 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 TUT1Q9H6E5 874 aaKnown RBP9.13□□□□□ -0.95
RFC1-207ENST00000504554 SETD4Q9NVD3 440 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 KCNJ14Q9UNX9 436 aa9.13□□□□□ -0.95
RFC1-207ENST00000504554 NOP56O00567 594 aaKnown RBP9.12□□□□□ -0.95
RFC1-207ENST00000504554 DHX15O43143 795 aaKnown RBP9.12□□□□□ -0.95
RFC1-207ENST00000504554 TREHO43280 583 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 NBNO60934 754 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 NR1I2O75469 434 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 DEXIO95424 95 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 CCNE2O96020 404 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 CYP3A4P08684 503 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 CKBP12277 381 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 TCF7P36402 384 aaPredicted RBP9.12□□□□□ -0.95
RFC1-207ENST00000504554 RFC5P40937 340 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 ADAM17P78536 824 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 AKAP17AQ02040 695 aaKnown RBP9.12□□□□□ -0.95
RFC1-207ENST00000504554 RBL2Q08999 1139 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 LIAT1Q6ZQX7 453 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 PLA2G4DQ86XP0 818 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 TEX2Q8IWB9 1127 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 REXO1Q8N1G1 1221 aaKnown RBP9.12□□□□□ -0.95
RFC1-207ENST00000504554 DEFB123Q8N688 67 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 GJA10Q969M2 543 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 GUCD1Q96NT3 240 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 SLKQ9H2G2 1235 aaPredicted RBP9.12□□□□□ -0.95
RFC1-207ENST00000504554 C6orf50Q9HD87 102 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 MTMR10Q9NXD2 777 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 COL6A3P12111 3177 aa9.12□□□□□ -0.95
RFC1-207ENST00000504554 DOCK5Q9H7D0 1870 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 EYSQ5T1H1 3165 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 C17orf102A2RUQ5 167 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 DDX39AO00148 427 aaKnown RBP9.11□□□□□ -0.95
RFC1-207ENST00000504554 CPLX1O14810 134 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 MAFGO15525 162 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 JAK2O60674 1132 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 LGR5O75473 907 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 FGBP02675 491 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 MARK3P27448 753 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 GNA11P29992 359 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 GCGRP47871 477 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 NEK4P51957 841 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 NLRP5P59047 1200 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 ACTR2P61160 394 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 USP46P62068 366 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 SMAD3P84022 425 aaKnown RBP9.11□□□□□ -0.95
RFC1-207ENST00000504554 PTK7Q13308 1070 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 EARS2Q5JPH6 523 aaKnown RBP9.11□□□□□ -0.95
RFC1-207ENST00000504554 MARCH8Q5T0T0 291 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 ZNF618Q5T7W0 954 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 PSRC1Q6PGN9 363 aaPredicted RBP9.11□□□□□ -0.95
RFC1-207ENST00000504554 RUFY4Q6ZNE9 571 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 ZNF598Q86UK7 904 aaKnown RBP9.11□□□□□ -0.95
RFC1-207ENST00000504554 SERINC5Q86VE9 423 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 LMBR1Q8WVP7 490 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 SEPT1Q8WYJ6 367 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 GTF3C6Q969F1 213 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 CDHR1Q96JP9 859 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 GLT8D2Q9H1C3 349 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 EHMT1Q9H9B1 1298 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 JPH1Q9HDC5 661 aaPredicted RBP9.11□□□□□ -0.95
RFC1-207ENST00000504554 SH3GLB2Q9NR46 395 aa9.11□□□□□ -0.95
RFC1-207ENST00000504554 SLC9A2Q9UBY0 812 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms