RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 KCNC3Q14003 757 aa18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 MARCH8Q5T0T0 291 aa18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 SYCE2Q6PIF2 218 aa18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 NLRX1Q86UT6 975 aa18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 RASGRP4Q8TDF6 673 aa18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 FAM49AQ9H0Q0 323 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 MFSD1Q9H3U5 465 aa18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 PCDHB7Q9Y5E2 793 aa18.25■□□□□ 0.51
PDLIM7-210ENST00000503827 RRN3P2A6NIE6 340 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 FSCN2O14926 492 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 SARSP49591 514 aaKnown RBP18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 IGBP1P78318 339 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 LLGL2Q6P1M3 1020 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 SEPT1Q8WYJ6 367 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 GLG1Q92896 1179 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 PIGSQ96S52 555 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 MAD2L2Q9UI95 211 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 DCHS1Q96JQ0 3298 aa18.24■□□□□ 0.51
PDLIM7-210ENST00000503827 IGSF9BQ9UPX0 1349 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 PALM3A6NDB9 673 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 CLCN5P51795 746 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 PLPP4Q5VZY2 271 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 CES5AQ6NT32 575 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 XRRA1Q6P2D8 792 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 NECTIN4Q96NY8 510 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 KRT23Q9C075 422 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 SMARCAD1Q9H4L7 1026 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 PUF60Q9UHX1 559 aaKnown RBP18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 LZTS1Q9Y250 596 aa18.23■□□□□ 0.51
PDLIM7-210ENST00000503827 TBKBP1A7MCY6 615 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 C2CD4DB7Z1M9 353 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 PDE1AP54750 535 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 TMEM62Q0P6H9 643 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 TPRNQ4KMQ1 711 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 PCNX4Q63HM2 1172 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 FAM43BQ6ZT52 329 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 COLGALT1Q8NBJ5 622 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 TNPO1Q92973 898 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 CELF4Q9BZC1 486 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 RIOX1Q9H6W3 641 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 ENTPD7Q9NQZ7 604 aa18.22■□□□□ 0.51
PDLIM7-210ENST00000503827 PNMA6FA0A0J9YX94 578 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 GSTTP1A0A1W2PQM5 241 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 NFX1Q12986 1120 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 ANKRD45Q5TZF3 282 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 MRPS27Q92552 414 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 CASP10Q92851 521 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 ZBTB10Q96DT7 871 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 CDHR1Q96JP9 859 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 TCF25Q9BQ70 676 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 TMX1Q9H3N1 280 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 POMKQ9H5K3 350 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 NGRNQ9NPE2 291 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 TYW1Q9NV66 732 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-210ENST00000503827 INSRRP14616 1297 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 LAG3P18627 525 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 PLCB3Q01970 1234 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 ITIH3Q06033 890 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 APOBRQ0VD83 1088 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 IMMTQ16891 758 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 RILPL2Q969X0 211 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 ADAM7Q9H2U9 754 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 C1orf112Q9NSG2 853 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 PCDHA2Q9Y5H9 948 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 KDM3AQ9Y4C1 1321 aa18.2■□□□□ 0.5
PDLIM7-210ENST00000503827 DENND3A2RUS2 1198 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 ATP9AO75110 1047 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 KCNA2P16389 499 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 KRT76Q01546 638 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 TMEM266Q2M3C6 531 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 FAM102BQ5T8I3 360 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 NME8Q8N427 588 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 FLCNQ8NFG4 579 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 CUL5Q93034 780 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 GPRASP2Q96D09 838 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 GVINP1Q7Z2Y8 2422 aa18.19■□□□□ 0.5
PDLIM7-210ENST00000503827 MED19A0JLT2 244 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 HIDE1A8MVS5 230 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 ASGR2P07307 311 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 MTHFRP42898 656 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 GRM4Q14833 912 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 SEC23AQ15436 765 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 SLC35G1Q2M3R5 365 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 ODR4Q5SWX8 454 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 SLC24A5Q71RS6 500 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 DGLUCYQ7Z3D6 616 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 PLCD3Q8N3E9 789 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 TDRD5Q8NAT2 981 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 CWH43Q9H720 699 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 HCSTQ9UBK5 93 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 CDH22Q9UJ99 828 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 VPS13AQ96RL7 3174 aa18.18■□□□□ 0.5
PDLIM7-210ENST00000503827 DMDP11532 3685 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms