RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FIZ1Q96SL8 496 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 PARVGQ9HBI0 331 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 SEL1LQ9UBV2 794 aa23.57■■□□□ 1.36
UBE2D3-216ENST00000503742 SFI1A8K8P3 1242 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 EIF3DO15371 548 aaKnown RBP eCLIP23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 PPP1R12BO60237 982 aaPredicted RBP23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 ATP9AO75110 1047 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 CCND2P30279 289 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 PDCL3Q9H2J4 239 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 ACAD9Q9H845 621 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 CETN3O15182 167 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 GCNT3O95395 438 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 NR3C2P08235 984 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 MYCT1Q8N699 235 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 PCMTD1Q96MG8 357 aaPredicted RBP23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 MAP7D2Q96T17 732 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 L2HGDHQ9H9P8 463 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 TYW1Q9NV66 732 aaKnown RBP23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 CYP39A1Q9NYL5 469 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 DNAI1Q9UI46 699 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 CSADQ9Y600 493 aa23.56■■□□□ 1.36
UBE2D3-216ENST00000503742 ARHGEF35A5YM69 484 aa23.55■■□□□ 1.36
UBE2D3-216ENST00000503742 NR2F2P24468 414 aa23.55■■□□□ 1.36
UBE2D3-216ENST00000503742 NSUN6Q8TEA1 469 aaKnown RBP23.55■■□□□ 1.36
UBE2D3-216ENST00000503742 GPRASP2Q96D09 838 aa23.55■■□□□ 1.36
UBE2D3-216ENST00000503742 A1CFQ9NQ94 594 aaKnown RBP23.55■■□□□ 1.36
UBE2D3-216ENST00000503742 DBR1Q9UK59 544 aaKnown RBP23.55■■□□□ 1.36
UBE2D3-216ENST00000503742 CALUO43852 315 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 QARSP47897 775 aaKnown RBP23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 TSR1Q2NL82 804 aaKnown RBP23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 CNKSR2Q8WXI2 1034 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 INPP4AQ96PE3 977 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 ASTN1O14525 1302 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 MYH11P35749 1972 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 A0A0G2JMZ2 1700 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 TESPA1A2RU30 521 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 MAFGO15525 162 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 ERCC3P19447 782 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 MAPK7Q13164 816 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 TREML2Q5T2D2 321 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 ACRBPQ8NEB7 543 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 TSC1Q92574 1164 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 L3MBTL3Q96JM7 780 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 FAM184BQ9ULE4 1060 aa23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 EPN1Q9Y6I3 576 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-216ENST00000503742 LCTP09848 1927 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 EPHB6O15197 1021 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 NMT1P30419 496 aaKnown RBP23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 JAK3P52333 1124 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 KRT76Q01546 638 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 KCNMA1Q12791 1236 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 SAMM50Q9Y512 469 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 KIAA1217Q5T5P2 1943 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 ZMYM2Q9UBW7 1377 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 UBE4BO95155 1302 aa23.53■■□□□ 1.36
UBE2D3-216ENST00000503742 A0A0U1RQJ8 604 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 NDUFA10O95299 355 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 CCNE2O96020 404 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 HNRNPH3P31942 346 aaKnown RBP23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 SFNP31947 248 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 IREB2P48200 963 aaKnown RBP23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 CDK17Q00537 523 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 KCNA1Q09470 495 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 PADI6Q6TGC4 694 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 ZNF720Q7Z2F6 126 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 FRMD5Q7Z6J6 570 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 DAW1Q8N136 415 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 ZNF397Q8NF99 534 aaPredicted RBP23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 ATRIPQ8WXE1 791 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 TGFB1I1O43294 461 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 NFIL3Q16649 462 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 LBX2Q6XYB7 198 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 NLRX1Q86UT6 975 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 C4orf19Q8IY42 314 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 SENP7Q9BQF6 1050 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 EDEM3Q9BZQ6 932 aa23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 FAM207AQ9NSI2 230 aaPredicted RBP23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.52■■□□□ 1.36
UBE2D3-216ENST00000503742 WDR64B1ANS9 1081 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 RGS20O76081 388 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 RARRES1P49788 294 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 GNG11P61952 73 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 PLS1Q14651 629 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 USP50Q70EL3 339 aaPredicted RBP23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 CCDC155Q8N6L0 562 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 CHST13Q8NET6 341 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 RDM1Q8NG50 284 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 SMCR8Q8TEV9 937 aaPredicted RBP23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 WDR24Q96S15 920 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 STRA6Q9BX79 667 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 MMRN2Q9H8L6 949 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 HIP1RO75146 1068 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 NR3C1P04150 777 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 PPATQ06203 517 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 UGCGQ16739 394 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 ZNF746Q6NUN9 644 aaPredicted RBP23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 MTERF4Q7Z6M4 381 aaKnown RBP23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 FAM178BQ8IXR5 827 aa23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 ZNHIT6Q9NWK9 470 aaKnown RBP23.51■■□□□ 1.35
UBE2D3-216ENST00000503742 PLAGL2Q9UPG8 496 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms