RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 DNM3Q9UQ16 869 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 EMSYQ7Z589 1322 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 IGSF9BQ9UPX0 1349 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 MYADML2A6NDP7 307 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 ADAMTS4O75173 837 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 LGALS2P05162 132 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 ATP4AP20648 1035 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 NKX3-2P78367 333 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 C16orf70Q9BSU1 422 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 STK17AQ9UEE5 414 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 MYH9P35579 1960 aaKnown RBP22.8■■□□□ 1.24
CDC42SE2-206ENST00000503291 ACTN4O43707 911 aaKnown RBP22.8■■□□□ 1.24
CDC42SE2-206ENST00000503291 KINO60870 393 aaKnown RBP22.8■■□□□ 1.24
CDC42SE2-206ENST00000503291 SLFN14P0C7P3 912 aa22.8■■□□□ 1.24
CDC42SE2-206ENST00000503291 CNNM3Q8NE01 707 aa22.8■■□□□ 1.24
CDC42SE2-206ENST00000503291 USP25Q9UHP3 1055 aa22.8■■□□□ 1.24
CDC42SE2-206ENST00000503291 TRAK2O60296 914 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 ZNF286BP0CG31 522 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 CCL5P13501 91 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 KLHL40Q2TBA0 621 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 SKOR2Q2VWA4 1001 aaPredicted RBP22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 KRBA2Q6ZNG9 492 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 CKAP2LQ8IYA6 745 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 CEP57L1Q8IYX8 460 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 STBD1O95210 358 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 YWHABP31946 246 aaKnown RBP22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 PRKCEQ02156 737 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 LARP4BQ92615 738 aaKnown RBP22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 RAD54LQ92698 747 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 TIGD1Q96MW7 591 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 RNF208Q9H0X6 261 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 CUEDC2Q9H467 287 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 PAK6Q9NQU5 681 aaPredicted RBP22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 ERAP1Q9NZ08 941 aa22.79■■□□□ 1.24
CDC42SE2-206ENST00000503291 BRCA2P51587 3418 aa22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 MYCNP04198 464 aaPredicted RBP22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 XRCC6P12956 609 aaKnown RBP eCLIP22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 MARK3P27448 753 aa22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 SLC26A2P50443 739 aa22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 ANO5Q75V66 913 aa22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 KLHDC9Q8NEP7 349 aa22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 ZNF333Q96JL9 665 aa22.78■■□□□ 1.24
CDC42SE2-206ENST00000503291 TMEM150BA6NC51 233 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 H3BRB1 525 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 MYL3P08590 195 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 MCM6Q14566 821 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 XKR3Q5GH77 459 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 ARMC5Q96C12 935 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 BHMT2Q9H2M3 363 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 TUT1Q9H6E5 874 aaKnown RBP22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 EYA4O95677 639 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 OATP04181 439 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 PLA2G4BP0C869 781 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 DHX8Q14562 1220 aaKnown RBP22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 STAMQ92783 540 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 DEFB118Q96PH6 123 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 RNPEPQ9H4A4 650 aa22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 ZNF215Q9UL58 517 aaPredicted RBP22.77■■□□□ 1.24
CDC42SE2-206ENST00000503291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 SV2BQ7L1I2 683 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 OTUD6AQ7L8S5 288 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 RNF180Q86T96 592 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 MTRQ99707 1265 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 SH2D3AQ9BRG2 576 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 NRBP2Q9NSY0 501 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 ANKEF1Q9NU02 776 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 KBTBD4Q9NVX7 518 aa22.76■■□□□ 1.23
CDC42SE2-206ENST00000503291 ZEB2O60315 1214 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 KPNA6O60684 536 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 SSBP05455 408 aaKnown RBP eCLIP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 CST5P28325 142 aaPredicted RBP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 AFMP43652 599 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 PURAQ00577 322 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 PLCB4Q15147 1175 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 KCNA10Q16322 511 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 CAMK4Q16566 473 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 PLA2G4FQ68DD2 849 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 SYT2Q8N9I0 419 aaPredicted RBP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 PAGE5Q96GU1 130 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 SEPT9Q9UHD8 586 aaPredicted RBP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 DBR1Q9UK59 544 aaKnown RBP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 F2P00734 622 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 RARRES1P49788 294 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 SLC12A3P55017 1021 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 LRRC41Q15345 812 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 CCSAPQ6IQ19 270 aaPredicted RBP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 KANK3Q6NY19 840 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 GRAMD1CQ8IYS0 662 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 ATP8B4Q8TF62 1192 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 BBXQ8WY36 941 aaPredicted RBP22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 KAT2BQ92831 832 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 FAM167AQ96KS9 214 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 MAGEF1Q9HAY2 307 aa22.75■■□□□ 1.23
CDC42SE2-206ENST00000503291 NPEPPSP55786 919 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 XKR9Q5GH70 373 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 CAVIN1Q6NZI2 390 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 SH3RF1Q7Z6J0 888 aa22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 PCSK9Q8NBP7 692 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 NIFKQ9BYG3 293 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-206ENST00000503291 TNMDQ9H2S6 317 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms