RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDC42SE2-204ENST00000502639 ZKSCAN5Q9Y2L8 839 aa6.09□□□□□ -1.43
CDC42SE2-204ENST00000502639 SPO11Q9Y5K1 396 aa6.09□□□□□ -1.43
CDC42SE2-204ENST00000502639 PMF1-BGLAPU3KQ54 211 aa6.09□□□□□ -1.43
CDC42SE2-204ENST00000502639 A0A1B0GTL3 188 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 GOLGA6L22H0YM25 854 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 H7C1D1 291 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 FOXP2O15409 715 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 GAS7O60861 476 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 FKBP9O95302 570 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 ENO2P09104 434 aaPredicted RBP6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 SMAD3P84022 425 aaKnown RBP6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 SMAD2Q15796 467 aaKnown RBP6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 SKIDA1Q1XH10 827 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 RNF187Q5TA31 235 aaPredicted RBP6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 VASNQ6EMK4 673 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 FKBP9P1Q75LS8 142 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 SAPCD2Q86UD0 394 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 GBP4Q96PP9 640 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 IRF2BPLQ9H1B7 796 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 MS4A5Q9H3V2 200 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZMAT4Q9H898 229 aa6.08□□□□□ -1.44
CDC42SE2-204ENST00000502639 LCHNA4D1U4 455 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 ANKRD62A6NC57 917 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 HIP1RO75146 1068 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 COL6A1P12109 1028 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 CFPP27918 469 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 GLRBP48167 497 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 LSSP48449 732 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 MLLT6P55198 1093 aaPredicted RBP6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 NFKB2Q00653 900 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 VMACQ2NL98 169 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 LRSAM1Q6UWE0 723 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 EFHBQ8N7U6 833 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 IGDCC4Q8TDY8 1250 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 EMC7Q9NPA0 242 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 ACSS2Q9NR19 701 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 UCKL1Q9NWZ5 548 aa6.07□□□□□ -1.44
CDC42SE2-204ENST00000502639 PRAMEF22A3QJZ6 481 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 PTGS1P23219 599 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 CNGA1P29973 690 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 KPNA1P52294 538 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 IL2P60568 153 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZNF385BQ569K4 471 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 PRAMEF18Q5VWM3 479 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 LCNL1Q6ZST4 164 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 DDX42Q86XP3 938 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 TTLL6Q8N841 843 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 TMX1Q9H3N1 280 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 PCDH18Q9HCL0 1135 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 DLL4Q9NR61 685 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 TOMM22Q9NS69 142 aa6.06□□□□□ -1.44
CDC42SE2-204ENST00000502639 SH3D21A4FU49 640 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 CYP17A1P05093 508 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 FNTBP49356 437 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 AFF3P51826 1226 aaKnown RBP6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 CAP1Q01518 475 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 STAT4Q14765 748 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZNF174Q15697 407 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 CT47A1Q5JQC4 288 aaPredicted RBP6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZCCHC14Q8WYQ9 949 aaKnown RBP6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ERCC4Q92889 916 aaPredicted RBP6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 USP7Q93009 1102 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 TACO1Q9BSH4 297 aaKnown RBP6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 SEMA4AQ9H3S1 761 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 PCIF1Q9H4Z3 704 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 IFT22Q9H7X7 185 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 PCDH12Q9NPG4 1184 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 INCENPQ9NQS7 918 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 KCND1Q9NSA2 647 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ARHGAP20Q9P2F6 1191 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ARHGAP28Q9P2N2 729 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZFP69BQ9UJL9 534 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ASB1Q9Y576 335 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 COL4A3BPQ9Y5P4 624 aa6.05□□□□□ -1.44
CDC42SE2-204ENST00000502639 ADAMTS20P59510 1910 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 NUAK1O60285 661 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZEB2O60315 1214 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 KNG1P01042 644 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 CDKN1CP49918 316 aaPredicted RBP6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 SART3Q15020 963 aaKnown RBP6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 TERF2Q15554 542 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 HIPK4Q8NE63 616 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 RTF1Q92541 710 aaKnown RBP6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZNF496Q96IT1 587 aaPredicted RBP6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 CLIC6Q96NY7 704 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 TTC1Q99614 292 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 VTA1Q9NP79 307 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 GALNT8Q9NY28 637 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 CROTQ9UKG9 612 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 ATP8A1Q9Y2Q0 1164 aa6.04□□□□□ -1.44
CDC42SE2-204ENST00000502639 RFXAPO00287 272 aa6.03□□□□□ -1.44
CDC42SE2-204ENST00000502639 ZNF28P17035 718 aa6.03□□□□□ -1.44
CDC42SE2-204ENST00000502639 RPL13P26373 211 aaKnown RBP6.03□□□□□ -1.44
CDC42SE2-204ENST00000502639 IL13P35225 146 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms