RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 ATRXP46100 2492 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 FNTAP49354 379 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 GALK1P51570 392 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 DSG1Q02413 1049 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 PTK2Q05397 1052 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 NFIAQ12857 509 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 SNX17Q15036 470 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 CATIPQ7Z7H3 387 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 STK39Q9UEW8 545 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 RTL1A6NKG5 1358 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 TCP11X1B4DZS4 312 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 NUP62P37198 522 aaPredicted RBP5.12□□□□□ -1.59
NEAT1-202ENST00000501122 ARHGEF6Q15052 776 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 TXNDC11Q6PKC3 985 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 A0A1B0GVL5 298 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 LZTS3O60299 673 aaPredicted RBP5.12□□□□□ -1.59
NEAT1-202ENST00000501122 CUEDC1Q9NWM3 386 aaPredicted RBP5.12□□□□□ -1.59
NEAT1-202ENST00000501122 CALUO43852 315 aaPredicted RBP5.12□□□□□ -1.59
NEAT1-202ENST00000501122 FOSP01100 380 aaPredicted RBP5.12□□□□□ -1.59
NEAT1-202ENST00000501122 TNNC2P02585 160 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 MTERF2Q49AM1 385 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 EPC2Q52LR7 807 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 NAA35Q5VZE5 725 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 ACAT2Q9BWD1 397 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 FARSBQ9NSD9 589 aaKnown RBP5.12□□□□□ -1.59
NEAT1-202ENST00000501122 KIF24Q5T7B8 1368 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 STX7O15400 261 aaKnown RBP5.12□□□□□ -1.59
NEAT1-202ENST00000501122 MPRIPQ6WCQ1 1025 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 SLC26A7Q8TE54 656 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 NFU1Q9UMS0 254 aa5.12□□□□□ -1.59
NEAT1-202ENST00000501122 HMGB3O15347 200 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CLASP2O75122 1294 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 ADSLP30566 484 aaPredicted RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 ZNF530Q6P9A1 599 aaPredicted RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 VPS16Q9H269 839 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 TMEM245Q9H330 911 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 MARCH7Q9H992 704 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 SPDYE5A6NIY4 337 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 RGS5O15539 181 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 A8MXQ7 604 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 EEF1GP26641 437 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 RSPH1Q8WYR4 309 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 NACAP1Q9BZK3 213 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CDC40O60508 579 aaKnown RBP eCLIP5.11□□□□□ -1.594e-32■■■□□ 16.8
NEAT1-202ENST00000501122 ALFQ53S48 1182 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 GPIHBP1Q8IV16 184 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 TUBA1CQ9BQE3 449 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 MRPL9Q9BYD2 267 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CLEC4MQ9H2X3 399 aaPredicted RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CTNNAL1Q9UBT7 734 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 STON1Q9Y6Q2 735 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 MKRN3Q13064 507 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CCNI2Q6ZMN8 369 aaPredicted RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 APPL2Q8NEU8 664 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 GRPEL2Q8TAA5 225 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 MTERF3Q96E29 417 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 ZNF285Q96NJ3 590 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 RGS9BPQ6ZS82 235 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 L3MBTL1Q9Y468 752 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CSE1LP55060 971 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 KRT17Q04695 432 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 PJA1Q8NG27 643 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 GIN1Q9NXP7 522 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 KCNK3O14649 394 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 MARSP56192 900 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 BNC1Q01954 994 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CLEC4GQ6UXB4 293 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 PREBQ9HCU5 417 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 N4BP1O75113 896 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 ZNF12P17014 697 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 PABPC1LQ4VXU2 614 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 TTC39AQ5SRH9 613 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 KSR2Q6VAB6 950 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CCDC22O60826 627 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 BCL10O95999 233 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 ZBED1O96006 694 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 OTUD4Q01804 1114 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 ZCCHC8Q6NZY4 707 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 TEX13BQ9BXU2 312 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 REXO4Q9GZR2 422 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 PLEKHA5Q9HAU0 1116 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CUTAO60888 179 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 SCG3Q8WXD2 468 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 HPCAL4Q9UM19 191 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 RAD51BO15315 384 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 KRT36O76013 467 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 JAK1P23458 1154 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 YWHAEP62258 255 aaKnown RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 VEPH1Q14D04 833 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 PLA2G4DQ86XP0 818 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 SERPINB13Q9UIV8 391 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 MUSKO15146 869 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 COBLO75128 1261 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 IL32P24001 234 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 SMARCA1P28370 1054 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 FERMT2Q96AC1 680 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.11□□□□□ -1.591e-323■□□□□ 10.1
NEAT1-202ENST00000501122 PFDN6O15212 129 aa5.11□□□□□ -1.59
NEAT1-202ENST00000501122 CCDC85BQ15834 202 aaPredicted RBP5.11□□□□□ -1.59
NEAT1-202ENST00000501122 ANGPTL8Q6UXH0 198 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms