RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ARL6IP4Q66PJ3 421 aaKnown RBP17.47■□□□□ 0.39
CPNE1-228ENST00000498814 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 BANK1Q8NDB2 785 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 NEK9Q8TD19 979 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 HSD17B14Q9BPX1 270 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 EIF2AK1Q9BQI3 630 aaKnown RBP17.47■□□□□ 0.39
CPNE1-228ENST00000498814 HIPK3Q9H422 1215 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 NRBP2Q9NSY0 501 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 CEP131Q9UPN4 1083 aa17.47■□□□□ 0.39
CPNE1-228ENST00000498814 ZBTB42B2RXF5 422 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 SLITRK3O94933 977 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 STBD1O95210 358 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 F13A1P00488 732 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 ITGB8P26012 769 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 RBL2Q08999 1139 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 BFSP2Q13515 415 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 PKP1Q13835 747 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 SF3A1Q15459 793 aaKnown RBP17.46■□□□□ 0.39
CPNE1-228ENST00000498814 XKR3Q5GH77 459 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 DTHD1Q6ZMT9 781 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 C4orf19Q8IY42 314 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 CCDC155Q8N6L0 562 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 IGSF22Q8N9C0 903 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 CAGE1Q8TC20 777 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 DHX38Q92620 1227 aaKnown RBP17.46■□□□□ 0.39
CPNE1-228ENST00000498814 DYDC2Q96IM9 177 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 NIFKQ9BYG3 293 aaKnown RBP17.46■□□□□ 0.39
CPNE1-228ENST00000498814 RAB34Q9BZG1 259 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 ZSWIM4Q9H7M6 989 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 RGL1Q9NZL6 768 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 TUBE1Q9UJT0 475 aa17.46■□□□□ 0.39
CPNE1-228ENST00000498814 TANC1Q9C0D5 1861 aa17.46■□□□□ 0.38
CPNE1-228ENST00000498814 IGBP1P78318 339 aa17.45■□□□□ 0.38
CPNE1-228ENST00000498814 IL17AQ16552 155 aa17.45■□□□□ 0.38
CPNE1-228ENST00000498814 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
CPNE1-228ENST00000498814 LBHD1Q9BQE6 289 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-228ENST00000498814 LXNQ9BS40 222 aa17.45■□□□□ 0.38
CPNE1-228ENST00000498814 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
CPNE1-228ENST00000498814 WRAP73Q9P2S5 460 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-228ENST00000498814 STK24Q9Y6E0 443 aa17.45■□□□□ 0.38
CPNE1-228ENST00000498814 LYPLA2O95372 231 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 BRD1O95696 1058 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 CYP2C18P33260 490 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 ANP32AP39687 249 aaKnown RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 CYP4A11Q02928 519 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 CTTNQ14247 550 aaKnown RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 PTPAQ15257 358 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 TARBP2Q15633 366 aaKnown RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 PRPF38BQ5VTL8 546 aaKnown RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 FOXD4L5Q5VV16 416 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 MFSD5Q6N075 450 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 TAF2Q6P1X5 1199 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 MTHFD1LQ6UB35 978 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 TRMT1LQ7Z2T5 733 aaKnown RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 RPAINQ86UA6 219 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 TPH2Q8IWU9 490 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 ERMNQ8TAM6 284 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 TRAPPC12Q8WVT3 735 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 FOXD4L4Q8WXT5 416 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 BADQ92934 168 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 WNT8BQ93098 351 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 ZNF396Q96N95 335 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 POLR3CQ9BUI4 534 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-228ENST00000498814 TUFT1Q9NNX1 390 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 LRWD1Q9UFC0 647 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 PCDHA2Q9Y5H9 948 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 ARID2Q68CP9 1835 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 UMODL1Q5DID0 1318 aa17.44■□□□□ 0.38
CPNE1-228ENST00000498814 DDX11L8A8MPP1 907 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 CAND2O75155 1236 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 RPLP2P05387 115 aaKnown RBP17.43■□□□□ 0.38
CPNE1-228ENST00000498814 SPATA31C1P0DKV0 1188 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 CKBP12277 381 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 KLRC1P26715 233 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 RPA1P27694 616 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 MAGEA10P43363 369 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-228ENST00000498814 ANO5Q75V66 913 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 CATSPER3Q86XQ3 398 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 RETREG2Q8NC44 543 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 USP28Q96RU2 1077 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 GDF15Q99988 308 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 FTOQ9C0B1 505 aaKnown RBP eCLIP17.43■□□□□ 0.38
CPNE1-228ENST00000498814 WNT8AQ9H1J5 351 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 SEPT9Q9UHD8 586 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-228ENST00000498814 ZDHHC9Q9Y397 364 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 MORC2Q9Y6X9 1032 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-228ENST00000498814 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
CPNE1-228ENST00000498814 SMIM35A0A1B0GVV1 85 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 VWA3AA6NCI4 1184 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 MAGEB2O15479 319 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 C22orf31O95567 290 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 SELPP16109 830 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 MUTP22033 750 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 YWHABP31946 246 aaKnown RBP17.42■□□□□ 0.38
CPNE1-228ENST00000498814 MDM2Q00987 491 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-228ENST00000498814 HAUS3Q68CZ6 603 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 ATL3Q6DD88 541 aa17.42■□□□□ 0.38
CPNE1-228ENST00000498814 RUFY4Q6ZNE9 571 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms