RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 MCTP2Q6DN12 878 aa23.11■■□□□ 1.29
LMBR1-219ENST00000498034 TSHZ1Q6ZSZ6 1077 aa23.11■■□□□ 1.29
LMBR1-219ENST00000498034 CCDC60Q8IWA6 550 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-219ENST00000498034 UHRF1Q96T88 793 aaPredicted RBP23.11■■□□□ 1.29
LMBR1-219ENST00000498034 ZNF577Q9BSK1 485 aa23.11■■□□□ 1.29
LMBR1-219ENST00000498034 AGO3Q9H9G7 860 aaKnown RBP23.11■■□□□ 1.29
LMBR1-219ENST00000498034 VPS54Q9P1Q0 977 aa23.11■■□□□ 1.29
LMBR1-219ENST00000498034 COG5Q9UP83 839 aa23.11■■□□□ 1.29
LMBR1-219ENST00000498034 ENPP3O14638 875 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 EPB41L2O43491 1005 aaKnown RBP23.1■■□□□ 1.29
LMBR1-219ENST00000498034 CD52P31358 61 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 SLC26A2P50443 739 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 IER5Q5VY09 327 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 FAM160B1Q5W0V3 765 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 MTHFD1LQ6UB35 978 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 HLA-CQ95604 372 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 LARP6Q9BRS8 491 aaKnown RBP23.1■■□□□ 1.29
LMBR1-219ENST00000498034 ZNF302Q9NR11 478 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 TRPV2Q9Y5S1 764 aa23.1■■□□□ 1.29
LMBR1-219ENST00000498034 RPLP2P05387 115 aaKnown RBP23.09■■□□□ 1.29
LMBR1-219ENST00000498034 SWSAP1Q6NVH7 229 aa23.09■■□□□ 1.29
LMBR1-219ENST00000498034 TMEM192Q8IY95 271 aa23.09■■□□□ 1.29
LMBR1-219ENST00000498034 CCDC148Q8NFR7 591 aa23.09■■□□□ 1.29
LMBR1-219ENST00000498034 IL17RAQ96F46 866 aa23.09■■□□□ 1.29
LMBR1-219ENST00000498034 SAMD11Q96NU1 681 aa23.09■■□□□ 1.29
LMBR1-219ENST00000498034 NECAB3Q96P71 396 aaPredicted RBP23.09■■□□□ 1.29
LMBR1-219ENST00000498034 CYP46A1Q9Y6A2 500 aa23.09■■□□□ 1.29
LMBR1-219ENST00000498034 LOXHD1Q8IVV2 1947 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 SMIM35A0A1B0GVV1 85 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 M0QZ92 97 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 HBP1O60381 514 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 NEFLP07196 543 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 ATP4AP20648 1035 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 KLRC1P26715 233 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 SETQ01105 290 aaPredicted RBP23.08■■□□□ 1.29
LMBR1-219ENST00000498034 PRR16Q569H4 304 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 MIS18BP1Q6P0N0 1132 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 PDXDC2PQ6P474 469 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 BICD2Q8TD16 824 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 ATP8B4Q8TF62 1192 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 LINC01599Q8WXQ3 324 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 CELF4Q9BZC1 486 aaKnown RBP23.08■■□□□ 1.29
LMBR1-219ENST00000498034 TBC1D22BQ9NU19 505 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 NLRC5Q86WI3 1866 aa23.08■■□□□ 1.29
LMBR1-219ENST00000498034 COL4A6Q14031 1691 aa23.07■■□□□ 1.28
LMBR1-219ENST00000498034 EDIL3O43854 480 aa23.07■■□□□ 1.28
LMBR1-219ENST00000498034 CIITAP33076 1130 aa23.07■■□□□ 1.28
LMBR1-219ENST00000498034 GPM6BQ13491 265 aa23.07■■□□□ 1.28
LMBR1-219ENST00000498034 RTN4RL1Q86UN2 441 aaPredicted RBP23.07■■□□□ 1.28
LMBR1-219ENST00000498034 FIBCD1Q8N539 461 aa23.07■■□□□ 1.28
LMBR1-219ENST00000498034 UPF3BQ9BZI7 483 aaKnown RBP23.07■■□□□ 1.28
LMBR1-219ENST00000498034 SQORQ9Y6N5 450 aa23.07■■□□□ 1.28
LMBR1-219ENST00000498034 H3BNC9 293 aa23.06■■□□□ 1.28
LMBR1-219ENST00000498034 NLRP5P59047 1200 aa23.06■■□□□ 1.28
LMBR1-219ENST00000498034 ZNF746Q6NUN9 644 aaPredicted RBP23.06■■□□□ 1.28
LMBR1-219ENST00000498034 TRMT1LQ7Z2T5 733 aaKnown RBP23.06■■□□□ 1.28
LMBR1-219ENST00000498034 NME8Q8N427 588 aa23.06■■□□□ 1.28
LMBR1-219ENST00000498034 TM6SF1Q9BZW5 370 aa23.06■■□□□ 1.28
LMBR1-219ENST00000498034 PADI3Q9ULW8 664 aa23.06■■□□□ 1.28
LMBR1-219ENST00000498034 IGSF9BQ9UPX0 1349 aa23.06■■□□□ 1.28
LMBR1-219ENST00000498034 KRT76Q01546 638 aa23.05■■□□□ 1.28
LMBR1-219ENST00000498034 SSRP1Q08945 709 aaKnown RBP23.05■■□□□ 1.28
LMBR1-219ENST00000498034 STK3Q13188 491 aa23.05■■□□□ 1.28
LMBR1-219ENST00000498034 CKAP2LQ8IYA6 745 aa23.05■■□□□ 1.28
LMBR1-219ENST00000498034 LENG9Q96B70 501 aa23.05■■□□□ 1.28
LMBR1-219ENST00000498034 MRPL38Q96DV4 380 aaKnown RBP23.05■■□□□ 1.28
LMBR1-219ENST00000498034 ZNF274Q96GC6 653 aaPredicted RBP23.05■■□□□ 1.28
LMBR1-219ENST00000498034 RC3H2Q9HBD1 1191 aaKnown RBP23.05■■□□□ 1.28
LMBR1-219ENST00000498034 SH3GLB2Q9NR46 395 aa23.05■■□□□ 1.28
LMBR1-219ENST00000498034 MAFBQ9Y5Q3 323 aaPredicted RBP23.05■■□□□ 1.28
LMBR1-219ENST00000498034 TTC3P53804 2025 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 COL1A2P08123 1366 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 TTC28Q96AY4 2481 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 ZBTB42B2RXF5 422 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 PAK2Q13177 524 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 ZNF484Q5JVG2 852 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 TRIM22Q8IYM9 498 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 KIAA0319LQ8IZA0 1049 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 ZNF689Q96CS4 500 aaPredicted RBP23.04■■□□□ 1.28
LMBR1-219ENST00000498034 CDHR5Q9HBB8 845 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 GINS2Q9Y248 185 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 PCDHA10Q9Y5I2 948 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 RALGAPA2Q2PPJ7 1873 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 ADGRA3Q8IWK6 1321 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 KDM3AQ9Y4C1 1321 aa23.04■■□□□ 1.28
LMBR1-219ENST00000498034 CPLX1O14810 134 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 PSAPP07602 524 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 LINC00271P0C7V0 271 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 PTPROQ16827 1216 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 TMEM266Q2M3C6 531 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 SMAP1Q8IYB5 467 aaPredicted RBP23.03■■□□□ 1.28
LMBR1-219ENST00000498034 FTHL17Q9BXU8 183 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 PDRG1Q9NUG6 133 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 GABBR1Q9UBS5 961 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 TCEAL9Q9UHQ7 104 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 SAMM50Q9Y512 469 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 MYH9P35579 1960 aaKnown RBP23.03■■□□□ 1.28
LMBR1-219ENST00000498034 EVPLQ92817 2033 aa23.03■■□□□ 1.28
LMBR1-219ENST00000498034 MSH4O15457 936 aa23.02■■□□□ 1.28
LMBR1-219ENST00000498034 DGKIO75912 1065 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms