RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CLASP2O75122 1294 aaKnown RBP4.83□□□□□ -1.64
PSPC1-205ENST00000497722 FBXO21O94952 628 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 MPIG6BO95866 241 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 KCNA6P17658 529 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 AOAHP28039 575 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 GJA4P35212 333 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 TOP3AQ13472 1001 aaPredicted RBP4.83□□□□□ -1.64
PSPC1-205ENST00000497722 STILQ15468 1287 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 RALYLQ86SE5 291 aaKnown RBP4.83□□□□□ -1.64
PSPC1-205ENST00000497722 SLC7A14Q8TBB6 771 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 MKL1Q969V6 931 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 SCLYQ96I15 445 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 KLC2Q9H0B6 622 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 SLC52A2Q9HAB3 445 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 PTPN22Q9Y2R2 807 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 ATP23Q9Y6H3 246 aa4.83□□□□□ -1.64
PSPC1-205ENST00000497722 CCDC66A2RUB6 948 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
PSPC1-205ENST00000497722 NAT1P18440 290 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 POLD1P28340 1107 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 HERVK_113P62684 666 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 TM4SF20Q53R12 229 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 FSTL4Q6MZW2 842 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 USP51Q70EK9 711 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 GPR155Q7Z3F1 870 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 NOSTRINQ8IVI9 506 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 ZFPM1Q8IX07 1006 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 CHST13Q8NET6 341 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 Q8TCH9 128 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 CATSPERZQ9NTU4 200 aa4.82□□□□□ -1.64
PSPC1-205ENST00000497722 FOXS1O43638 330 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 CUTAO60888 179 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 IGSF3O75054 1194 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 SRGAP2CP0DJJ0 459 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 IL13RA1P78552 427 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 USP10Q14694 798 aaKnown RBP4.81□□□□□ -1.64
PSPC1-205ENST00000497722 WNK4Q96J92 1243 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 AMNQ9BXJ7 453 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 RIC8BQ9NVN3 520 aa4.81□□□□□ -1.64
PSPC1-205ENST00000497722 MATN2O00339 956 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 GSTA4O15217 222 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 EFCAB14O75071 495 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 ZNF623O75123 536 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 PTGS1P23219 599 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 MC4RP32245 332 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 ACVRL1P37023 503 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 ETV4P43268 484 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 DUSP8Q13202 625 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 CRY1Q16526 586 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 KANK2Q63ZY3 851 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 TCTN3Q6NUS6 607 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 ABHD17CQ6PCB6 329 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 CXXC5Q7LFL8 322 aaKnown RBP4.8□□□□□ -1.64
PSPC1-205ENST00000497722 OVCH1Q7RTY7 1134 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 SPRED1Q7Z699 444 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 Q8N1X5 172 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 DLG3Q92796 817 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 GNRHR2Q96P88 292 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 CARD11Q9BXL7 1154 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 CELF4Q9BZC1 486 aaKnown RBP4.8□□□□□ -1.64
PSPC1-205ENST00000497722 ZDHHC5Q9C0B5 715 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 INCENPQ9NQS7 918 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 GALNT8Q9NY28 637 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 TESMINQ9Y4I5 508 aa4.8□□□□□ -1.64
PSPC1-205ENST00000497722 ESYT3A0FGR9 886 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 RASSF10A6NK89 507 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 KCNK3O14649 394 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 RASGRP1O95267 797 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 KRT15P19012 456 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 SELENOPP49908 381 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 EIF4HQ15056 248 aaKnown RBP4.79□□□□□ -1.64
PSPC1-205ENST00000497722 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 FAM47CQ5HY64 1035 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 DPP8Q6V1X1 898 aaPredicted RBP4.79□□□□□ -1.64
PSPC1-205ENST00000497722 ZC3H7AQ8IWR0 971 aaKnown RBP4.79□□□□□ -1.64
PSPC1-205ENST00000497722 NEIL1Q96FI4 390 aaPredicted RBP4.79□□□□□ -1.64
PSPC1-205ENST00000497722 TRIM39Q9HCM9 518 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 JADE2Q9NQC1 790 aa4.79□□□□□ -1.64
PSPC1-205ENST00000497722 TMA7Q9Y2S6 64 aaKnown RBP4.79□□□□□ -1.64
PSPC1-205ENST00000497722 CCDC163A0A0D9SF12 145 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 TCRBV16S1A1N1A0A5B0 115 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 FZD7O75084 574 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 CLSTN1O94985 981 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 DNM2P50570 870 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 ST5P78524 1137 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 NFYCQ13952 458 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 TBR1Q16650 682 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 TRIM68Q6AZZ1 485 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 ZNF585AQ6P3V2 769 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 LARP4Q71RC2 724 aaKnown RBP eCLIP4.78□□□□□ -1.64
PSPC1-205ENST00000497722 FGD2Q7Z6J4 655 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 NOP9Q86U38 636 aaKnown RBP4.78□□□□□ -1.64
PSPC1-205ENST00000497722 LILRB2Q8N423 598 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 ZSWIM2Q8NEG5 633 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 SH3RF3Q8TEJ3 882 aaPredicted RBP4.78□□□□□ -1.64
PSPC1-205ENST00000497722 THAP3Q8WTV1 239 aaPredicted RBP4.78□□□□□ -1.64
PSPC1-205ENST00000497722 CFHR4Q92496 578 aa4.78□□□□□ -1.64
PSPC1-205ENST00000497722 LMF1Q96S06 567 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms