RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 FUT2Q10981 343 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 ZCRB1Q8TBF4 217 aaKnown RBP14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 TLCD1Q96CP7 247 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 A6NHS1 94 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 SEC23AQ15436 765 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 FAM114A2Q9NRY5 505 aa14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 DNAJC17Q9NVM6 304 aaKnown RBP14.19□□□□□ -0.14
GAPVD1-220ENST00000497580 IRS4O14654 1257 aaPredicted RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 MYBP10242 640 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 USP11P51784 963 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 KCNMA1Q12791 1236 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 SEPT2Q15019 361 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 CCDC6Q16204 474 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 ZC3H12AQ5D1E8 599 aaKnown RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 ARL6IP4Q66PJ3 421 aaKnown RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 NUDCD1Q96RS6 583 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 TRIM7Q9C029 511 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 SEMA4AQ9H3S1 761 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 ACTN1P12814 892 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 CREB1P16220 341 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 EIF3BP55884 814 aaKnown RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 EVX2Q03828 476 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 LRRC23Q53EV4 343 aaPredicted RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 FITM2Q8N6M3 262 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 FBXO25Q8TCJ0 367 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 PBKQ96KB5 322 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 TSG101Q99816 390 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 ECM29Q5VYK3 1845 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 CCNT1O60563 726 aaKnown RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 TRAPPC10P48553 1259 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 BCAMP50895 628 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 TBC1D25Q3MII6 688 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 INTS8Q75QN2 995 aaKnown RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 RMDN2Q96LZ7 410 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 SEPT11Q9NVA2 429 aaKnown RBP14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 TMOD3Q9NYL9 352 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 DAAM1Q9Y4D1 1078 aa14.18□□□□□ -0.14
GAPVD1-220ENST00000497580 UQCRFS1P1P0C7P4 283 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 ABCB4P21439 1286 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 TXKP42681 527 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 ADAM9Q13443 819 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 MEX3CQ5U5Q3 659 aaKnown RBP14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 RNF25Q96BH1 459 aaPredicted RBP14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 ADAM7Q9H2U9 754 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 RGL1Q9NZL6 768 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 AFDNP55196 1824 aaKnown RBP14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 RASGRF2O14827 1237 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 FGFR1OPO95684 399 aaKnown RBP14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 MMP13P45452 471 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 AMPD3Q01432 767 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 DR1Q01658 176 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 LONRF1Q17RB8 773 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 TSNAXIP1Q2TAA8 658 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 BORCS6Q96GS4 357 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 PDE8BO95263 885 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 TARSP26639 723 aaKnown RBP14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 ERFP50548 548 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 ZNF131P52739 623 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 KLC1Q07866 573 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 TROAPQ12815 778 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 CUL3Q13618 768 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 TNIP1Q15025 636 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 ARHGAP22Q7Z5H3 698 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 UCMAQ8WVF2 138 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 IQCDQ96DY2 449 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 KCNMB3Q9NPA1 279 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 CEP72Q9P209 647 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 KLHL14Q9P2G3 628 aa14.17□□□□□ -0.14
GAPVD1-220ENST00000497580 CLSTN1O94985 981 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 PTK2Q05397 1052 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 SEPT14Q6ZU15 432 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 TRIM74Q86UV6 250 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 TRIM73Q86UV7 250 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 C4orf32Q8N8J7 132 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 CALML4Q96GE6 196 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 TBK1Q9UHD2 729 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 TMEM59LQ9UK28 342 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 ACSL3O95573 720 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 SPTY2D1Q68D10 685 aaPredicted RBP14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 BICDL1Q6ZP65 573 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 SV2BQ7L1I2 683 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 PTPN22Q9Y2R2 807 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 RTCBQ9Y3I0 505 aaKnown RBP14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 RGPD2P0DJD1 1756 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 CCDC188H7C350 402 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 RNF8O76064 485 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 PYGBP11216 843 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 ALADP13716 330 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 BNIP1Q12981 228 aa14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 ALKBH5Q6P6C2 394 aaKnown RBP14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 DRAXINQ8NBI3 349 aaPredicted RBP14.16□□□□□ -0.14
GAPVD1-220ENST00000497580 U2AF1L4Q8WU68 220 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms