RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 PCDHA10Q9Y5I2 948 aa12.95□□□□□ -0.34
HLA-B-254ENST00000497377 TANC1Q9C0D5 1861 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 RRN3P2A6NIE6 340 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 BACH1O14867 736 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 CAND2O75155 1236 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 PSMD10O75832 226 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
HLA-B-254ENST00000497377 PFKMP08237 780 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 CYP2C18P33260 490 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 RFC2P35250 354 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 ADAM17P78536 824 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 GUCY1B3Q02153 619 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 ORC2Q13416 577 aaPredicted RBP12.94□□□□□ -0.34
HLA-B-254ENST00000497377 CUL4AQ13619 759 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 GNL2Q13823 731 aaKnown RBP12.94□□□□□ -0.34
HLA-B-254ENST00000497377 EARS2Q5JPH6 523 aaKnown RBP12.94□□□□□ -0.34
HLA-B-254ENST00000497377 SLFN12Q8IYM2 578 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
HLA-B-254ENST00000497377 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 WNT8AQ9H1J5 351 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 KCNMB3Q9NPA1 279 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 ZNF302Q9NR11 478 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 TRIOBPQ9H2D6 2365 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 WDR81Q562E7 1941 aa12.94□□□□□ -0.34
HLA-B-254ENST00000497377 SLC37A4O43826 429 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 HBP1O60381 514 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 BAG4O95429 457 aaKnown RBP12.93□□□□□ -0.34
HLA-B-254ENST00000497377 NUDT7P0C024 238 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 CSF2RAP15509 400 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 MARK3P27448 753 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 PPFIA1Q13136 1202 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 SWSAP1Q6NVH7 229 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 PDXDC2PQ6P474 469 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
HLA-B-254ENST00000497377 CCDC60Q8IWA6 550 aaPredicted RBP12.93□□□□□ -0.34
HLA-B-254ENST00000497377 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 SETD4Q9NVD3 440 aa12.93□□□□□ -0.34
HLA-B-254ENST00000497377 MAFBQ9Y5Q3 323 aaPredicted RBP12.93□□□□□ -0.34
HLA-B-254ENST00000497377 UMODL1Q5DID0 1318 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 TREHO43280 583 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 MARCH6O60337 910 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 SLC34A2O95436 690 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 CKBP12277 381 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 SELPP16109 830 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 U2AF2P26368 475 aaKnown RBP eCLIP12.92□□□□□ -0.34
HLA-B-254ENST00000497377 GJB2P29033 226 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 TRAPPC10P48553 1259 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 CCL23P55773 120 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 ZNF200P98182 395 aaPredicted RBP12.92□□□□□ -0.34
HLA-B-254ENST00000497377 PPP2R5CQ13362 524 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 HIC1Q14526 733 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 PLCB4Q15147 1175 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 GRIK4Q16099 956 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 TRIM71Q2Q1W2 868 aaKnown RBP12.92□□□□□ -0.34
HLA-B-254ENST00000497377 LRIT3Q3SXY7 679 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 TAF2Q6P1X5 1199 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 B3GNT9Q6UX72 402 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 MIER3Q7Z3K6 550 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 RPAINQ86UA6 219 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 NOSTRINQ8IVI9 506 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 ATP8B4Q8TF62 1192 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 LMBR1Q8WVP7 490 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 DHX38Q92620 1227 aaKnown RBP12.92□□□□□ -0.34
HLA-B-254ENST00000497377 SNX21Q969T3 373 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 FAM167AQ96KS9 214 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 UIMC1Q96RL1 719 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
HLA-B-254ENST00000497377 UNC45AQ9H3U1 944 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 NOL7Q9UMY1 257 aaKnown RBP12.92□□□□□ -0.34
HLA-B-254ENST00000497377 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 COL1A2P08123 1366 aa12.92□□□□□ -0.34
HLA-B-254ENST00000497377 IGSF9BQ9UPX0 1349 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 MBLAC1A4D2B0 266 aaPredicted RBP12.91□□□□□ -0.34
HLA-B-254ENST00000497377 K7ELQ4 463 aaPredicted RBP12.91□□□□□ -0.34
HLA-B-254ENST00000497377 NEMFO60524 1076 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 INSRRP14616 1297 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 SHHQ15465 462 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 CALCRLQ16602 461 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 ZNF484Q5JVG2 852 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 RSPH3Q86UC2 560 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 BBXQ8WY36 941 aaPredicted RBP12.91□□□□□ -0.34
HLA-B-254ENST00000497377 INTS4Q96HW7 963 aaKnown RBP12.91□□□□□ -0.34
HLA-B-254ENST00000497377 GABBR1Q9UBS5 961 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 TUBE1Q9UJT0 475 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 CEP131Q9UPN4 1083 aa12.91□□□□□ -0.34
HLA-B-254ENST00000497377 H3BQV1 296 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 CHMP2AO43633 222 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 DKC1O60832 514 aaKnown RBP eCLIP12.9□□□□□ -0.34
HLA-B-254ENST00000497377 FGBP02675 491 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 PDCP20941 246 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 EPHB4P54760 987 aa12.9□□□□□ -0.34
HLA-B-254ENST00000497377 TMEM240Q5SV17 173 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms