RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 KIAA1841Q6NSI8 718 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 C1orf210Q8IVY1 113 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 SAMD3Q8N6K7 520 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 COLGALT1Q8NBJ5 622 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 TCP11L1Q9NUJ3 509 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 IGSF9Q9P2J2 1179 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 CDY2AQ9Y6F7 541 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 DNAH14Q0VDD8 3507 aa13.59□□□□□ -0.23
ATG3-209ENST00000496423 FANCMQ8IYD8 2048 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 TBKBP1A7MCY6 615 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 SPTLC1O15269 473 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 CCND2P30279 289 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 PPM1AP35813 382 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 SARSP49591 514 aaKnown RBP13.58□□□□□ -0.24
ATG3-209ENST00000496423 SP2Q02086 613 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 PAK2Q13177 524 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 SMC1AQ14683 1233 aaKnown RBP13.58□□□□□ -0.24
ATG3-209ENST00000496423 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
ATG3-209ENST00000496423 ODR4Q5SWX8 454 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 RARS2Q5T160 578 aaKnown RBP13.58□□□□□ -0.24
ATG3-209ENST00000496423 RTN4RL1Q86UN2 441 aaPredicted RBP13.58□□□□□ -0.24
ATG3-209ENST00000496423 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 SUMF1Q8NBK3 374 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 TNPO1Q92973 898 aaKnown RBP13.58□□□□□ -0.24
ATG3-209ENST00000496423 PDCD2LQ9BRP1 358 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 SIT1Q9Y3P8 196 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 HCFC2Q9Y5Z7 792 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 CHD8Q9HCK8 2581 aa13.58□□□□□ -0.24
ATG3-209ENST00000496423 CHD6Q8TD26 2715 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 MYH6P13533 1939 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 CEP250Q9BV73 2442 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 M0R2C6 588 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 ORC4O43929 436 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
ATG3-209ENST00000496423 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
ATG3-209ENST00000496423 CA8P35219 290 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 MRPS6P82932 125 aaKnown RBP13.57□□□□□ -0.24
ATG3-209ENST00000496423 APOBRQ0VD83 1088 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 UTP14CQ5TAP6 766 aaKnown RBP13.57□□□□□ -0.24
ATG3-209ENST00000496423 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 DNAJB3Q8WWF6 145 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 ATRIPQ8WXE1 791 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 TYW1Q9NV66 732 aaKnown RBP13.57□□□□□ -0.24
ATG3-209ENST00000496423 TUBE1Q9UJT0 475 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 PADI3Q9ULW8 664 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
ATG3-209ENST00000496423 ATRXP46100 2492 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 MAP1BP46821 2468 aaKnown RBP13.56□□□□□ -0.24
ATG3-209ENST00000496423 HIDE1A8MVS5 230 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 STAM2O75886 525 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 PPFIA1Q13136 1202 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 COL9A3Q14050 684 aaPredicted RBP13.56□□□□□ -0.24
ATG3-209ENST00000496423 PGM5Q15124 567 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 ZNF528Q3MIS6 628 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 STOX1Q6ZVD7 989 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 LINC01599Q8WXQ3 324 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 UBA5Q9GZZ9 404 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 AGO3Q9H9G7 860 aaKnown RBP13.56□□□□□ -0.24
ATG3-209ENST00000496423 KCNK12Q9HB15 430 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 C1orf112Q9NSG2 853 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 PCDHA1Q9Y5I3 950 aa13.56□□□□□ -0.24
ATG3-209ENST00000496423 FNDC1Q4ZHG4 1894 aaPredicted RBP13.55□□□□□ -0.24
ATG3-209ENST00000496423 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 CFHP08603 1231 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 SNHG28P0DPA3 235 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 GATMP50440 423 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 HSD17B4P51659 736 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 TRAF1Q13077 416 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 PPM1JQ5JR12 505 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 RRP12Q5JTH9 1297 aaKnown RBP13.55□□□□□ -0.24
ATG3-209ENST00000496423 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 CYFIP1Q7L576 1253 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 MRPL43Q8N983 215 aaKnown RBP13.55□□□□□ -0.24
ATG3-209ENST00000496423 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
ATG3-209ENST00000496423 LRRCC1Q9C099 1032 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 CDH22Q9UJ99 828 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
ATG3-209ENST00000496423 RRN3P2A6NIE6 340 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 GOLGA8HP0CJ92 632 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.24
ATG3-209ENST00000496423 GIT2Q14161 759 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 GRIK4Q16099 956 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 ADGRF4Q8IZF3 695 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 DDX1Q92499 740 aaKnown RBP13.54□□□□□ -0.24
ATG3-209ENST00000496423 NXPE3Q969Y0 559 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 ZNF558Q96NG5 402 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 AMNQ9BXJ7 453 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 TBC1D17Q9HA65 648 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 ATP6V0A4Q9HBG4 840 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 SPG21Q9NZD8 308 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
ATG3-209ENST00000496423 ANGPTL2Q9UKU9 493 aa13.54□□□□□ -0.24
ATG3-209ENST00000496423 SUPT16HQ9Y5B9 1047 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms