RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 SNX29Q8TEQ0 813 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 BBXQ8WY36 941 aaPredicted RBP16.53■□□□□ 0.24
HDAC9-226ENST00000496026 DPF3Q92784 378 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 AK8Q96MA6 479 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 HSD17B14Q9BPX1 270 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 POLR3CQ9BUI4 534 aaPredicted RBP16.53■□□□□ 0.24
HDAC9-226ENST00000496026 TUFT1Q9NNX1 390 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 SETD4Q9NVD3 440 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
HDAC9-226ENST00000496026 NOD1Q9Y239 953 aa16.53■□□□□ 0.24
HDAC9-226ENST00000496026 MORC2Q9Y6X9 1032 aaPredicted RBP16.53■□□□□ 0.24
HDAC9-226ENST00000496026 NRCAMQ92823 1304 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 B4GALT4O60513 344 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 PPP6R2O75170 966 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 SLITRK3O94933 977 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 INSRRP14616 1297 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 RPA1P27694 616 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 CDC25AP30304 524 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 IGBP1P78318 339 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 TLE2Q04725 743 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 GRIK4Q16099 956 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 XKR3Q5GH77 459 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 GDF6Q6KF10 455 aaPredicted RBP16.52■□□□□ 0.24
HDAC9-226ENST00000496026 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 FAM126BQ8IXS8 530 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 C4orf19Q8IY42 314 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 CHAMP1Q96JM3 812 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 CLIC6Q96NY7 704 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 CSRNP2Q9H175 543 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 TRPV6Q9H1D0 765 aa16.52■□□□□ 0.24
HDAC9-226ENST00000496026 WRAP73Q9P2S5 460 aaPredicted RBP16.52■□□□□ 0.24
HDAC9-226ENST00000496026 SEPT9Q9UHD8 586 aaPredicted RBP16.52■□□□□ 0.24
HDAC9-226ENST00000496026 RRN3P2A6NIE6 340 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 EVI5O60447 810 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 MED24O75448 989 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 UBA7P41226 1012 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 ME1P48163 572 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 GRIN1Q05586 938 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 ZRSR1Q15695 479 aaKnown RBP16.51■□□□□ 0.23
HDAC9-226ENST00000496026 PTGISQ16647 500 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 ZNF484Q5JVG2 852 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 OTUD6AQ7L8S5 288 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 CATSPER3Q86XQ3 398 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 LMBR1Q8WVP7 490 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 TOX2Q96NM4 488 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 SCAND2PQ9GZW5 306 aaPredicted RBP16.51■□□□□ 0.23
HDAC9-226ENST00000496026 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
HDAC9-226ENST00000496026 RCOR1Q9UKL0 485 aa16.51■□□□□ 0.23
HDAC9-226ENST00000496026 SPATA31C1P0DKV0 1188 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 MUTP22033 750 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 YWHABP31946 246 aaKnown RBP16.5■□□□□ 0.23
HDAC9-226ENST00000496026 RGS19P49795 217 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
HDAC9-226ENST00000496026 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 CABP7Q86V35 215 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 C7orf61Q8IZ16 206 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 TRAPPC12Q8WVT3 735 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 CCDC43Q96MW1 224 aaKnown RBP16.5■□□□□ 0.23
HDAC9-226ENST00000496026 COL1A2P08123 1366 aa16.5■□□□□ 0.23
HDAC9-226ENST00000496026 KDM3AQ9Y4C1 1321 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 TMEM150BA6NC51 233 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 CUTAO60888 179 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 STBD1O95210 358 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 LYPLA2O95372 231 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 CD4P01730 458 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 CLTBP09497 229 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 HOXC8P31273 242 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 TXLNAP40222 546 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 FAAP100Q0VG06 881 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 HIC1Q14526 733 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 PLA2G4FQ68DD2 849 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 LEO1Q8WVC0 666 aaPredicted RBP16.49■□□□□ 0.23
HDAC9-226ENST00000496026 CALML4Q96GE6 196 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 NACC1Q96RE7 527 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 MMTAG2Q9BU76 263 aaKnown RBP16.49■□□□□ 0.23
HDAC9-226ENST00000496026 NIFKQ9BYG3 293 aaKnown RBP16.49■□□□□ 0.23
HDAC9-226ENST00000496026 PRDM5Q9NQX1 630 aaPredicted RBP16.49■□□□□ 0.23
HDAC9-226ENST00000496026 TMEM39AQ9NV64 488 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 TUBE1Q9UJT0 475 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 SCN10AQ9Y5Y9 1956 aa16.49■□□□□ 0.23
HDAC9-226ENST00000496026 BRCA2P51587 3418 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 A0A087WWV3 80 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 TREHO43280 583 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 KLRC1P26715 233 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 XKR9Q5GH70 373 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 ANO5Q75V66 913 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 PIGOQ8TEQ8 1089 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 CEP170P1Q96L14 293 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 SH2D3AQ9BRG2 576 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 ANKEF1Q9NU02 776 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 DDX19AQ9NUU7 478 aaKnown RBP16.48■□□□□ 0.23
HDAC9-226ENST00000496026 PRKAG2Q9UGJ0 569 aa16.48■□□□□ 0.23
HDAC9-226ENST00000496026 KIAA1024Q9UPX6 916 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms