RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 BMP7P18075 431 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 SLURP1P55000 103 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 OCRLQ01968 901 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 ADAM9Q13443 819 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 FAM50AQ14320 339 aaKnown RBP7.95□□□□□ -1.14
CCDC39-207ENST00000495817 SKOR2Q2VWA4 1001 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-207ENST00000495817 ODR4Q5SWX8 454 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 HHIPL2Q6UWX4 724 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 LHFPL2Q6ZUX7 228 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 OTOP1Q7RTM1 612 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 NXPE1Q8N323 547 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 CD244Q9BZW8 370 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 ZCCHC4Q9H5U6 513 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 PARD6AQ9NPB6 346 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 DLL4Q9NR61 685 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 ATP23Q9Y6H3 246 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 LTFP02788 710 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 AMY2AP04746 511 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 PTPN1P18031 435 aaKnown RBP7.94□□□□□ -1.14
CCDC39-207ENST00000495817 AMY2BP19961 511 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 LSSP48449 732 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 SARSP49591 514 aaKnown RBP7.94□□□□□ -1.14
CCDC39-207ENST00000495817 IL2P60568 153 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 GRIN1Q05586 938 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 VMACQ2NL98 169 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 PRR31Q5SQ13 230 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 PTRH1Q86Y79 214 aaKnown RBP7.94□□□□□ -1.14
CCDC39-207ENST00000495817 C2orf69Q8N8R5 385 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 SMURF1Q9HCE7 757 aa7.94□□□□□ -1.14
CCDC39-207ENST00000495817 PTPDC1A2A3K4 754 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 CLASP2O75122 1294 aaKnown RBP7.93□□□□□ -1.14
CCDC39-207ENST00000495817 FKBP9O95302 570 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 CHGBP05060 677 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 ADCYAP1R1P41586 468 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 KCNC1P48547 511 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 FAM26FQ5R3K3 315 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 CD276Q5ZPR3 534 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 TTLL10Q6ZVT0 673 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 FKBP9P1Q75LS8 142 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 OSTM1Q86WC4 334 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 PROSER1Q86XN7 944 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 RBM12BQ8IXT5 1001 aaKnown RBP7.93□□□□□ -1.14
CCDC39-207ENST00000495817 DTX3Q8N9I9 347 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 SCYL1Q96KG9 808 aa7.93□□□□□ -1.14
CCDC39-207ENST00000495817 PARNO95453 639 aaKnown RBP7.92□□□□□ -1.14
CCDC39-207ENST00000495817 ENO2P09104 434 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-207ENST00000495817 INHBBP09529 407 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 ATP2A2P16615 1042 aaKnown RBP7.92□□□□□ -1.14
CCDC39-207ENST00000495817 KRT15P19012 456 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 ID4P47928 161 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 JAM2P57087 298 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 FAPQ12884 760 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 BTBD8Q5XKL5 378 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 CISD2Q8N5K1 135 aaKnown RBP7.92□□□□□ -1.14
CCDC39-207ENST00000495817 JDP2Q8WYK2 163 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 ASPSCR1Q9BZE9 553 aa7.92□□□□□ -1.14
CCDC39-207ENST00000495817 G3BP2Q9UN86 482 aaKnown RBP7.92□□□□□ -1.14
CCDC39-207ENST00000495817 KATNA1O75449 491 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 ZNF28P17035 718 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 KPNA1P52294 538 aaPredicted RBP7.91□□□□□ -1.14
CCDC39-207ENST00000495817 GJA9P57773 515 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 HERVK_113P62684 666 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 MTMR1Q13613 665 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 TMC5Q6UXY8 1006 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 ADAMTS17Q8TE56 1095 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 CHTF18Q8WVB6 975 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 SYT3Q9BQG1 590 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 SPATA25Q9BR10 227 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 BOCQ9BWV1 1114 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 KRTAP9-9Q9BYP9 154 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 KRTAP9-4Q9BYQ2 154 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 RIC8BQ9NVN3 520 aa7.91□□□□□ -1.14
CCDC39-207ENST00000495817 THG1LQ9NWX6 298 aaKnown RBP7.91□□□□□ -1.14
CCDC39-207ENST00000495817 A0A1B0GTL3 188 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 SLC12A8A0AV02 714 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 ZNF839A8K0R7 811 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 ACOT7O00154 380 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 ULK1O75385 1050 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 ALDH1L1O75891 902 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 DBPQ10586 325 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-207ENST00000495817 ATP13A4Q4VNC1 1196 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 FRMD5Q7Z6J6 570 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 STK32CQ86UX6 486 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 ZNF761Q86XN6 746 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-207ENST00000495817 NOSTRINQ8IVI9 506 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 ADGRG2Q8IZP9 1017 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 EFHBQ8N7U6 833 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 IGDCC4Q8TDY8 1250 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 GPR101Q96P66 508 aaPredicted RBP7.9□□□□□ -1.14
CCDC39-207ENST00000495817 MENTQ9BUN1 341 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 XYLT2Q9H1B5 865 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 EMC7Q9NPA0 242 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 OXSMQ9NWU1 459 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 WASF3Q9UPY6 502 aa7.9□□□□□ -1.14
CCDC39-207ENST00000495817 THRAP3Q9Y2W1 955 aaKnown RBP7.9□□□□□ -1.14
CCDC39-207ENST00000495817 C9orf118A6NHY6 69 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 FAM90A27PA6NNH2 459 aa7.89□□□□□ -1.15
CCDC39-207ENST00000495817 K7ESF4 209 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms