RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 P4HBP07237 508 aaKnown RBP11.38□□□□□ -0.59
HDAC3-214ENST00000495485 MYCLP12524 364 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-214ENST00000495485 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-214ENST00000495485 GAP43P17677 238 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDAC3-214ENST00000495485 JAK3P52333 1124 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 STX17P56962 302 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 KRT76Q01546 638 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 LRRC63Q05C16 580 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 TRIM14Q14142 442 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 MAP3K21Q5TCX8 1036 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 DYMQ7RTS9 669 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 CCDC112Q8NEF3 446 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 MORC4Q8TE76 937 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 P2RX5Q93086 422 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 CCDC43Q96MW1 224 aaKnown RBP11.38□□□□□ -0.59
HDAC3-214ENST00000495485 TAAR1Q96RJ0 339 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 PDCD2LQ9BRP1 358 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 ABHD16BQ9H3Z7 469 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 HMX1Q9NP08 348 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-214ENST00000495485 VAV3Q9UKW4 847 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDAC3-214ENST00000495485 COL4A3BPQ9Y5P4 624 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 LCTP09848 1927 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 KIAA1217Q5T5P2 1943 aa11.38□□□□□ -0.59
HDAC3-214ENST00000495485 PDE4DIPQ5VU43 2346 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 POTEB3A0JP26 581 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 LRRC10BA6NIK2 292 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 E9PMD0 336 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 PEX10O60683 326 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 COBLO75128 1261 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 MED24O75448 989 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 NR3C2P08235 984 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
HDAC3-214ENST00000495485 EIF2AK2P19525 551 aaKnown RBP11.37□□□□□ -0.59
HDAC3-214ENST00000495485 PTGS1P23219 599 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 CAP1Q01518 475 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 BAATQ14032 418 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-214ENST00000495485 HERC4Q5GLZ8 1057 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-214ENST00000495485 FAM26FQ5R3K3 315 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 CDKAL1Q5VV42 579 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 POTEBQ6S5H4 581 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 PPP4R3CPQ6ZMV5 832 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 FILIP1Q7Z7B0 1213 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 PPFIBP1Q86W92 1011 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 LRRC8AQ8IWT6 810 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 TPH2Q8IWU9 490 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 MYOCDQ8IZQ8 938 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 CSGALNACT2Q8N6G5 542 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 TRIB2Q92519 343 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 ABHD8Q96I13 439 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 TIPINQ9BVW5 301 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 ZSWIM4Q9H7M6 989 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 KCNH7Q9NS40 1196 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 SEL1LQ9UBV2 794 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 LIMA1Q9UHB6 759 aaKnown RBP11.37□□□□□ -0.59
HDAC3-214ENST00000495485 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 SAMM50Q9Y512 469 aa11.37□□□□□ -0.59
HDAC3-214ENST00000495485 A0A1B0GTH6 734 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 KCNJ18B7U540 433 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 N4BP3O15049 544 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 GNA14O95837 355 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 INHAP05111 366 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 SPATA31C1P0DKV0 1188 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 ARP10275 920 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 CYP11B2P19099 503 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 COASYQ13057 564 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 KCNJ12Q14500 433 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 STXBP2Q15833 593 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 TCP11X2Q5H9J9 407 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 SPECC1LQ69YQ0 1117 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 KCNV1Q6PIU1 500 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 VSTM4Q8IW00 320 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-214ENST00000495485 CYP2W1Q8TAV3 490 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 HSD17B14Q9BPX1 270 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 SRRTQ9BXP5 876 aaKnown RBP11.36□□□□□ -0.59
HDAC3-214ENST00000495485 HSD3B7Q9H2F3 369 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 AGO4Q9HCK5 861 aaKnown RBP11.36□□□□□ -0.59
HDAC3-214ENST00000495485 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 SLC39A2Q9NP94 309 aa11.36□□□□□ -0.59
HDAC3-214ENST00000495485 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
HDAC3-214ENST00000495485 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 ARHGEF35A5YM69 484 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 WDR64B1ANS9 1081 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 CHMP2AO43633 222 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 SLITRK3O94933 977 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 PGK2P07205 417 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 GJB1P08034 283 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
HDAC3-214ENST00000495485 TAL1P17542 331 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-214ENST00000495485 ITGB5P18084 799 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 EDNRBP24530 442 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 ALDH5A1P51649 535 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-214ENST00000495485 STK4Q13043 487 aa11.35□□□□□ -0.59
HDAC3-214ENST00000495485 NR1I3Q14994 352 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms