RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 KIF13BQ9NQT8 1826 aa13□□□□□ -0.33
TRIM2-209ENST00000494872 A0A0A6YYK5 440 aaPredicted RBP12.99□□□□□ -0.33
TRIM2-209ENST00000494872 TRAPPC3O43617 180 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 CEP104O60308 925 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 PAEPP09466 180 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 PRKCIP41743 596 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 RNASE9P60153 205 aaKnown RBP12.99□□□□□ -0.33
TRIM2-209ENST00000494872 ARID5AQ03989 594 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 PTK2Q05397 1052 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 ZNF844Q08AG5 666 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 KCNH2Q12809 1159 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 ADAM9Q13443 819 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 UAP1Q16222 522 aaPredicted RBP12.99□□□□□ -0.33
TRIM2-209ENST00000494872 IRF2BP2Q7Z5L9 587 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 RASGEF1CQ8N431 466 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 HAS1Q92839 578 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 DDX25Q9UHL0 483 aaKnown RBP12.99□□□□□ -0.33
TRIM2-209ENST00000494872 MYO3BQ8WXR4 1341 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
TRIM2-209ENST00000494872 GOLGA6L7A0A1B0GV03 622 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 CHUKO15111 745 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SART1O43290 800 aaKnown RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 RASSF9O75901 435 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 FLOT1O75955 427 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 ZBTB48P10074 688 aaPredicted RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 HPDP32754 393 aaPredicted RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 TNNI2P48788 182 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 CLK2P49760 499 aaKnown RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 MRPL12P52815 198 aaKnown RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 IFT88Q13099 833 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SPDYCQ5MJ68 293 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 FRMD5Q7Z6J6 570 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 CCDC13Q8IYE1 715 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 CCDC26Q8TAB7 109 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SCFD1Q8WVM8 642 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SPAG5Q96R06 1193 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 COA1Q9GZY4 146 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 LRRC4BQ9NT99 713 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 NAGPAQ9UK23 515 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 INTUQ9ULD6 942 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 PCDHA12Q9UN75 941 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 C5orf60A6NFR6 353 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 NPEPPSP55786 919 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 PPP2R2AP63151 447 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 HERC4Q5GLZ8 1057 aaPredicted RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 DPY19L2P1Q6NXN4 242 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 ZNF571Q7Z3V5 609 aaPredicted RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SLFN11Q7Z7L1 901 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 TAX1BP1Q86VP1 789 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SEC14L1Q92503 715 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 P3H4Q92791 437 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 CUL5Q93034 780 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 PPANQ9NQ55 473 aaKnown RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 SUCLA2Q9P2R7 463 aaPredicted RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 NOC2LQ9Y3T9 749 aaKnown RBP12.98□□□□□ -0.33
TRIM2-209ENST00000494872 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
TRIM2-209ENST00000494872 MARCH6O60337 910 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 PLA2G4BP0C869 781 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 UCHL3P15374 230 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 MAP2K2P36507 400 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 EIF6P56537 245 aaKnown RBP12.97□□□□□ -0.33
TRIM2-209ENST00000494872 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
TRIM2-209ENST00000494872 VPS36Q86VN1 386 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 METTL13Q8N6R0 699 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 TPCN2Q8NHX9 752 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 POLD4Q9HCU8 107 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 FAM114A2Q9NRY5 505 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 KLC4Q9NSK0 619 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 SERPINB13Q9UIV8 391 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 HDAC9Q9UKV0 1011 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 NENFQ9UMX5 172 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 FOCADQ5VW36 1801 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 MYH4Q9Y623 1939 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 AFPP02771 609 aaKnown RBP12.97□□□□□ -0.33
TRIM2-209ENST00000494872 CDR1P51861 262 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 UBE2SQ16763 222 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 GPATCH4Q5T3I0 446 aaKnown RBP12.97□□□□□ -0.33
TRIM2-209ENST00000494872 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 USP40Q9NVE5 1235 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 TBC1D7Q9P0N9 293 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 DDX20Q9UHI6 824 aaKnown RBP12.97□□□□□ -0.33
TRIM2-209ENST00000494872 TRAF3IP3Q9Y228 551 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
TRIM2-209ENST00000494872 KLRG2A4D1S0 409 aaPredicted RBP12.96□□□□□ -0.33
TRIM2-209ENST00000494872 KRIT1O00522 736 aa12.96□□□□□ -0.33
TRIM2-209ENST00000494872 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
TRIM2-209ENST00000494872 RIMBP2O15034 1052 aa12.96□□□□□ -0.33
TRIM2-209ENST00000494872 PPP1R11O60927 126 aaPredicted RBP12.96□□□□□ -0.33
TRIM2-209ENST00000494872 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms