RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 C17orf80Q9BSJ5 609 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 SUGCTQ9HAC7 445 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 VPS54Q9P1Q0 977 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 KIAA1671Q9BY89 1806 aa15.24■□□□□ 0.03
CTDSP1-212ENST00000494067 CYP3A4P08684 503 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 IFNAR1P17181 557 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 ATP4AP20648 1035 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 PTPROQ16827 1216 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 FAM160B1Q5W0V3 765 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 ABHD15Q6UXT9 468 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 PLA2G4DQ86XP0 818 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 BICD2Q8TD16 824 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 AGO3Q9H9G7 860 aaKnown RBP15.23■□□□□ 0.03
CTDSP1-212ENST00000494067 ZBTB42B2RXF5 422 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 BACH1O14867 736 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 NEFLP07196 543 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 LINC00271P0C7V0 271 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 TMEM62Q0P6H9 643 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 NPY5RQ15761 445 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 FBXO47Q5MNV8 452 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 CCDC148Q8NFR7 591 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 IL17RAQ96F46 866 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 FAM49AQ9H0Q0 323 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 CDY2AQ9Y6F7 541 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 RALGAPA2Q2PPJ7 1873 aa15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 TCF20Q9UGU0 1960 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-212ENST00000494067 POTEB3A0JP26 581 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 EPB41L2O43491 1005 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 MRPS6P82932 125 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 SETQ01105 290 aaPredicted RBP15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 POTEBQ6S5H4 581 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 TSHZ1Q6ZSZ6 1077 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 REXO1Q8N1G1 1221 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 NME8Q8N427 588 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 GJA10Q969M2 543 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 TBC1D22BQ9NU19 505 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 RWDD3Q9Y3V2 267 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 PCDHA2Q9Y5H9 948 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 SQORQ9Y6N5 450 aa15.21■□□□□ 0.03
CTDSP1-212ENST00000494067 IPO5O00410 1097 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 HBP1O60381 514 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 KCNQ1P51787 676 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 STK3Q13188 491 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 EPC2Q52LR7 807 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 ODR4Q5SWX8 454 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 RTN4RL1Q86UN2 441 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 TRIM22Q8IYM9 498 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 ZNF577Q9BSK1 485 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 FTHL17Q9BXU8 183 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 RC3H2Q9HBD1 1191 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 ZNF302Q9NR11 478 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 TRPV2Q9Y5S1 764 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 EVPLQ92817 2033 aa15.2■□□□□ 0.02
CTDSP1-212ENST00000494067 MYH9P35579 1960 aaKnown RBP15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 SMIM35A0A1B0GVV1 85 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 M0R2N6 131 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 BMP1P13497 986 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 CD52P31358 61 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 CIITAP33076 1130 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 GPM6BQ13491 265 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 PRR16Q569H4 304 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 PDXDC2PQ6P474 469 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 MTHFD1LQ6UB35 978 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 FAM43BQ6ZT52 329 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 TMEM192Q8IY95 271 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 MRPL38Q96DV4 380 aaKnown RBP15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 NECAB3Q96P71 396 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 TM6SF1Q9BZW5 370 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 RNF216Q9NWF9 866 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 CYP46A1Q9Y6A2 500 aa15.19■□□□□ 0.02
CTDSP1-212ENST00000494067 TTC3P53804 2025 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 H3BNC9 293 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 ENPP3O14638 875 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 CPLX1O14810 134 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 PSAPP07602 524 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 STAG3L1P0CL83 205 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 KRT76Q01546 638 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 TIGD5Q53EQ6 642 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 ZNF484Q5JVG2 852 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 SWSAP1Q6NVH7 229 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 CRIPAKQ8N1N5 446 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 TMEM40Q8WWA1 233 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 CELF4Q9BZC1 486 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 TMX1Q9H3N1 280 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 GJB4Q9NTQ9 266 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
CTDSP1-212ENST00000494067 COL1A2P08123 1366 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 MSH4O15457 936 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 RB1P06400 928 aa15.17■□□□□ 0.02
CTDSP1-212ENST00000494067 KLRC1P26715 233 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms