RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TRIM4Q9C037 500 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 MROH8Q9H579 483 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 MAFFQ9ULX9 164 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 ATP2A1O14983 1001 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 ERLIN2O94905 339 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 ICAM1P05362 532 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 CYP2B6P20813 491 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 MAGEA10P43363 369 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-222ENST00000493919 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
BRCA1-222ENST00000493919 NEK2P51955 445 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 CSE1LP55060 971 aaKnown RBP12.78□□□□□ -0.36
BRCA1-222ENST00000493919 SEPT7Q16181 437 aaKnown RBP12.78□□□□□ -0.36
BRCA1-222ENST00000493919 RTN1Q16799 776 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 Q4G0T1 1027 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 FBXO46Q6PJ61 603 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-222ENST00000493919 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 GBP7Q8N8V2 638 aaPredicted RBP12.78□□□□□ -0.36
BRCA1-222ENST00000493919 JMJD4Q9H9V9 463 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 RNF146Q9NTX7 359 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 HDAC6Q9UBN7 1215 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
BRCA1-222ENST00000493919 BAZ2BQ9UIF8 2168 aaKnown RBP12.77□□□□□ -0.36
BRCA1-222ENST00000493919 FCER1AP12319 257 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 PTPREP23469 700 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 IL4RP24394 825 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 TOB2Q14106 344 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-222ENST00000493919 KCTD2Q14681 263 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 PKN2Q16513 984 aaKnown RBP12.77□□□□□ -0.37
BRCA1-222ENST00000493919 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.77□□□□□ -0.37
BRCA1-222ENST00000493919 AGAP9Q5VTM2 703 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 CWF19L1Q69YN2 538 aaKnown RBP12.77□□□□□ -0.37
BRCA1-222ENST00000493919 RSPH3Q86UC2 560 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 PLPP6Q8IY26 295 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 SAMD14Q8IZD0 417 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-222ENST00000493919 FANCBQ8NB91 859 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 SPC24Q8NBT2 197 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 GOLGA1Q92805 767 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 SLC35B4Q969S0 331 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 MMP19Q99542 508 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 MAP3K14Q99558 947 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 SLC7A5P2Q9GIP4 190 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 MUC3BQ9H195 1237 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 ACAD8Q9UKU7 415 aa12.77□□□□□ -0.37
BRCA1-222ENST00000493919 HIP1RO75146 1068 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ZFXP17010 805 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ADORA2AP29274 412 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 NEK4P51957 841 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 PRMT2P55345 433 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 GRB14Q14449 540 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 RCN1Q15293 331 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 SLC35G1Q2M3R5 365 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 SLC9C1Q4G0N8 1177 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 MAB21L3Q8N8X9 362 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 CCDC112Q8NEF3 446 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-222ENST00000493919 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 PIGSQ96S52 555 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 MTRQ99707 1265 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 CAPS2Q9BXY5 557 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 AGXT2Q9BYV1 514 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ACAD9Q9H845 621 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 SLC30A1Q9Y6M5 507 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 CYTH3O43739 400 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ELNP15502 786 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 RGS2P41220 211 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 GNAQP50148 359 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 STK3Q13188 491 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 TMTC3Q6ZXV5 915 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 DPP9Q86TI2 863 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ANKRD35Q8N283 1001 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 CHCHD4Q8N4Q1 142 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 SH3TC2Q8TF17 1288 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ZFAND2BQ8WV99 257 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 EPAS1Q99814 870 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 JPH2Q9BR39 696 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-222ENST00000493919 ST7Q9NRC1 585 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 DNAAF2Q9NVR5 837 aaKnown RBP12.76□□□□□ -0.37
BRCA1-222ENST00000493919 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
BRCA1-222ENST00000493919 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 RBBP6Q7Z6E9 1792 aaKnown RBP12.75□□□□□ -0.37
BRCA1-222ENST00000493919 SLC15A5A6NIM6 579 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 SPDYE3A6NKU9 549 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 ZBTB5O15062 677 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 KDM1AO60341 852 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 MYCP01106 439 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-222ENST00000493919 PGK2P07205 417 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 RPSAP08865 295 aaKnown RBP12.75□□□□□ -0.37
BRCA1-222ENST00000493919 ZNF131P52739 623 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 CLNS1AP54105 237 aaKnown RBP12.75□□□□□ -0.37
BRCA1-222ENST00000493919 AK2P54819 239 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 USP4Q13107 963 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 MAP2K5Q13163 448 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 MORN1Q5T089 497 aa12.75□□□□□ -0.37
BRCA1-222ENST00000493919 NSMFQ6X4W1 530 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms