RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 H3BML4 177 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 MAN2B1O00754 1011 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 C5AR1P21730 350 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 SSTR4P31391 388 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 TM4SF4P48230 202 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 TRAPPC10P48553 1259 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 ALDH5A1P51649 535 aaPredicted RBP5.52□□□□□ -1.53
GTF3A-208ENST00000493903 STK3Q13188 491 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 SLC9A5Q14940 896 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 IFI16Q16666 785 aaKnown RBP5.52□□□□□ -1.53
GTF3A-208ENST00000493903 GAB4Q2WGN9 574 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 HLA-DQA1Q5Y7H0 255 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 ESRP1Q6NXG1 681 aaKnown RBP5.52□□□□□ -1.53
GTF3A-208ENST00000493903 CEP68Q76N32 757 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 ZNF765Q7L2R6 523 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 THAP5Q7Z6K1 395 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 NLRP10Q86W26 655 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 PTRH1Q86Y79 214 aaKnown RBP5.52□□□□□ -1.53
GTF3A-208ENST00000493903 DPF3Q92784 378 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 TRMT2BQ96GJ1 504 aaKnown RBP5.52□□□□□ -1.53
GTF3A-208ENST00000493903 C16orf92Q96LL3 132 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 ACO2Q99798 780 aaKnown RBP5.52□□□□□ -1.53
GTF3A-208ENST00000493903 OSBPL1AQ9BXW6 950 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 GTPBP4Q9BZE4 634 aaKnown RBP5.52□□□□□ -1.53
GTF3A-208ENST00000493903 WNT8AQ9H1J5 351 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 KCNH7Q9NS40 1196 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 SRPK3Q9UPE1 567 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 PPP2R3BQ9Y5P8 575 aa5.52□□□□□ -1.53
GTF3A-208ENST00000493903 DTNBO60941 627 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 TUSC2O75896 110 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 DGKIO75912 1065 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 MED26O95402 600 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 CENPBP07199 599 aaPredicted RBP5.51□□□□□ -1.53
GTF3A-208ENST00000493903 MYL3P08590 195 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 SLC5A1P13866 664 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 ZKSCAN1P17029 563 aaPredicted RBP5.51□□□□□ -1.53
GTF3A-208ENST00000493903 PTX3P26022 381 aaPredicted RBP5.51□□□□□ -1.53
GTF3A-208ENST00000493903 HALP42357 657 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 SLC5A3P53794 718 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 MRPS9P82933 396 aaKnown RBP5.51□□□□□ -1.53
GTF3A-208ENST00000493903 CYP27A1Q02318 531 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 BTKQ06187 659 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 LRP8Q14114 963 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 ARTNQ5T4W7 220 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 USP45Q70EL2 814 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 KCNK18Q7Z418 384 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 RIOX2Q8IUF8 465 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 PRR18Q8N4B5 295 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 PAF1Q8N7H5 531 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 ZBTB34Q8NCN2 500 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 VPS37AQ8NEZ2 397 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 SH3RF2Q8TEC5 729 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 PARD3BQ8TEW8 1205 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 TGFBRAP1Q8WUH2 860 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 PGBD4Q96DM1 585 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 MVB12AQ96EY5 273 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 RAX2Q96IS3 184 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 MS4A5Q9H3V2 200 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 MKNK2Q9HBH9 465 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 NGRNQ9NPE2 291 aaKnown RBP5.51□□□□□ -1.53
GTF3A-208ENST00000493903 LUZP4Q9P127 313 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 MSRAQ9UJ68 235 aa5.51□□□□□ -1.53
GTF3A-208ENST00000493903 COA3Q9Y2R0 106 aaPredicted RBP5.51□□□□□ -1.53
GTF3A-208ENST00000493903 CCDC180Q9P1Z9 1646 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 SCDO00767 359 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 HYAL3O43820 417 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 NDUFS2O75306 463 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 SDHAP31040 664 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 HOXA10P31260 410 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 GJA4P35212 333 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 CD97P48960 835 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 PPM1FP49593 454 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 SRSF2Q01130 221 aaKnown RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 UGT8Q16880 541 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 LONRF1Q17RB8 773 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 MROH9Q5TGP6 573 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 FSTL4Q6MZW2 842 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 CYP4F22Q6NT55 531 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 DARS2Q6PI48 645 aaKnown RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 ESPNLQ6ZVH7 1005 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 TMPRSS7Q7RTY8 843 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 OVCH2Q7RTZ1 564 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 CXorf67Q86X51 503 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 DENND1CQ8IV53 801 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 GRAMD1CQ8IYS0 662 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 STK11IPQ8N1F8 1099 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 FAM156AQ8NDB6 213 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 UHMK1Q8TAS1 419 aaKnown RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 ATXN2LQ8WWM7 1075 aaKnown RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 ZNF496Q96IT1 587 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 MAML3Q96JK9 1138 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 FCRL2Q96LA5 508 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 METTL22Q9BUU2 404 aaPredicted RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 RC3H2Q9HBD1 1191 aaKnown RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 SLC6A20Q9NP91 592 aa5.5□□□□□ -1.53
GTF3A-208ENST00000493903 TRMT13Q9NUP7 481 aaKnown RBP5.5□□□□□ -1.53
GTF3A-208ENST00000493903 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.5□□□□□ -1.538e-6■■■□□ 18.6
GTF3A-208ENST00000493903 PIM2Q9P1W9 311 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms