RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 TM6SF1Q9BZW5 370 aa7.72□□□□□ -1.17
TRA2B-216ENST00000493864 OSBPL5Q9H0X9 879 aaPredicted RBP7.72□□□□□ -1.17
TRA2B-216ENST00000493864 GSX1Q9H4S2 264 aaPredicted RBP7.72□□□□□ -1.17
TRA2B-216ENST00000493864 VEZTQ9HBM0 779 aa7.72□□□□□ -1.17
TRA2B-216ENST00000493864 SCAF8Q9UPN6 1271 aaKnown RBP7.72□□□□□ -1.17
TRA2B-216ENST00000493864 CDK5RAP2Q96SN8 1893 aa7.72□□□□□ -1.17
TRA2B-216ENST00000493864 CNTNAP1P78357 1384 aa7.71□□□□□ -1.17
TRA2B-216ENST00000493864 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 DDTLA6NHG4 134 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 MYO1BO43795 1136 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 ENTPD3O75355 529 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 VEGFAP15692 232 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 CASTP20810 708 aaKnown RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 MAP4P27816 1152 aaKnown RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 NEK4P51957 841 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 KRT32Q14532 448 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 RABEP1Q15276 862 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 SEZ6Q53EL9 994 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 AKNAD1Q5T1N1 836 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 FKBP1CQ5VVH2 108 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 MFSD6Q6ZSS7 791 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 RNF214Q8ND24 703 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 FAM151AQ8WW52 585 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 NEK1Q96PY6 1258 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 YIPF2Q9BWQ6 316 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 NT5C1AQ9BXI3 368 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 SSU72Q9NP77 194 aaKnown RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 ADARB2Q9NS39 739 aaKnown RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 TMOD2Q9NZR1 351 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 ARPP21Q9UBL0 812 aaPredicted RBP7.71□□□□□ -1.18
TRA2B-216ENST00000493864 HACL1Q9UJ83 578 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 INPP5FQ9Y2H2 1132 aa7.71□□□□□ -1.18
TRA2B-216ENST00000493864 MYH1P12882 1939 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 B4E1Z4 1266 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 PRDM1O75626 825 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 NFICP08651 508 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 FGRP09769 529 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 HSPA6P17066 643 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 PSMA5P28066 241 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 EPHX2P34913 555 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 ETF1P62495 437 aaKnown RBP7.7□□□□□ -1.18
TRA2B-216ENST00000493864 EXOSC10Q01780 885 aaKnown RBP7.7□□□□□ -1.18
TRA2B-216ENST00000493864 RING1Q06587 406 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 RASA3Q14644 834 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 RRP12Q5JTH9 1297 aaKnown RBP7.7□□□□□ -1.18
TRA2B-216ENST00000493864 ZBTB37Q5TC79 503 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 ANGEL2Q5VTE6 544 aaKnown RBP7.7□□□□□ -1.18
TRA2B-216ENST00000493864 BLOC1S2Q6QNY1 142 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 BEND4Q6ZU67 534 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 RUFY3Q7L099 469 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 CYB5R4Q7L1T6 521 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 CHST3Q7LGC8 479 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 TTC6Q86TZ1 520 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 FAM83AQ86UY5 434 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 AMOTL1Q8IY63 956 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 SMYD4Q8IYR2 804 aaPredicted RBP7.7□□□□□ -1.18
TRA2B-216ENST00000493864 SLC44A5Q8NCS7 719 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 STAG1Q8WVM7 1258 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 NKD1Q969G9 470 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 TCEANC2Q96MN5 208 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 TMEM39BQ9GZU3 492 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 ACSS3Q9H6R3 686 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 CAPN10Q9HC96 672 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 TOMM22Q9NS69 142 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 PGAP2Q9UHJ9 254 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.7□□□□□ -1.18
TRA2B-216ENST00000493864 CYP46A1Q9Y6A2 500 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 ECM29Q5VYK3 1845 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 NEDD4P46934 1319 aa7.7□□□□□ -1.18
TRA2B-216ENST00000493864 FANCGO15287 622 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 ORC4O43929 436 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 SLC3A2P08195 630 aaKnown RBP7.69□□□□□ -1.18
TRA2B-216ENST00000493864 RPS6KB1P23443 525 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 GRK4P32298 578 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 ANTXR2P58335 489 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 GABPAQ06546 454 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 TRDNQ13061 729 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 PRAMEF18Q5VWM3 479 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 DLK2Q6UY11 383 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 C16orf86Q6ZW13 317 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 RALYLQ86SE5 291 aaKnown RBP7.69□□□□□ -1.18
TRA2B-216ENST00000493864 FOXP4Q8IVH2 680 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-216ENST00000493864 MB21D2Q8IYB1 491 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-216ENST00000493864 NCOA7Q8NI08 942 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 ISL2Q96A47 359 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 TTC14Q96N46 770 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 LRRC3Q9BY71 257 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 LRRC2Q9BYS8 371 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 DEFB129Q9H1M3 183 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 DHX36Q9H2U1 1008 aaKnown RBP7.69□□□□□ -1.18
TRA2B-216ENST00000493864 SEMA6CQ9H3T2 930 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 RNF41Q9H4P4 317 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-216ENST00000493864 TAF1DQ9H5J8 278 aaPredicted RBP7.69□□□□□ -1.18
TRA2B-216ENST00000493864 MKNK2Q9HBH9 465 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 BRMS1Q9HCU9 246 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 PDRG1Q9NUG6 133 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 GGA3Q9NZ52 723 aa7.69□□□□□ -1.18
TRA2B-216ENST00000493864 ZSWIM5Q9P217 1185 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms